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ACD20_59

Alias: ACD20_3620.49982.14

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_59_1

Not on your lists

comp(290..1114)
DNA (825bp) protein (275aa)
seg (db=Seg db_id=seg from=58 to=69)
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=16 to=174 evalue=4.5e-24)
no description (db=Gene3D db_id=G3DSA:3.40.390.10 from=16 to=174 evalue=4.3e-12)
Peptidase_M10 (db=HMMPfam db_id=PF00413 from=44 to=173 evalue=1.5e-11 interpro_id=IPR001818 interpro_description=Peptidase M10, metallopeptidase GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508), Molecular Function: zinc ion binding (GO:0008270), Cellular Component: extracellular matrix (GO:0031012))
ACD20_59_2

Not on your lists

1357..1704
DNA (348bp) protein (116aa)
hypothetical protein
seg (db=Seg db_id=seg from=7 to=20)
coiled-coil (db=Coil db_id=coil from=6 to=34 evalue=NA)
seg (db=Seg db_id=seg from=32 to=47)
ACD20_59_3

Not on your lists

1706..2302
DNA (597bp) protein (199aa)
recR; recombination protein RecR
RECR (db=PatternScan db_id=PS01300 from=57 to=78 evalue=0.0 interpro_id=IPR015967 interpro_description=Zinc finger C4-type, RecR GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
recR: recombination protein RecR (db=HMMTigr db_id=TIGR00615 from=1 to=196 evalue=6.4e-119 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Recombination protein RecR (db=superfamily db_id=SSF111304 from=1 to=198 evalue=7.1e-81 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD20_59_4

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comp(2370..4166)
DNA (1797bp) protein (599aa)
flagellar hook-associated 2-like protein
seg (db=Seg db_id=seg from=373 to=386)
seg (db=Seg db_id=seg from=266 to=277)
seg (db=Seg db_id=seg from=391 to=402)
ACD20_59_5

Not on your lists

comp(4393..4668)
DNA (276bp) protein (92aa)
histone family protein DNA-binding protein
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=9.9e-38 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=90 evalue=3.2e-33 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD20_59_6

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4913..5971
DNA (1059bp) protein (353aa)
hypothetical protein
UPI00006C21E7 related cluster n=1 Tax=unknown RepID=UPI00006C21E7 (db=UNIREF evalue=9.0e-15 bit_score=84.7 identity=38.35 coverage=36.8271954674221)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=2 to=14)
ACD20_59_7

Not on your lists

comp(6021..6407)
DNA (387bp) protein (129aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKE03185.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_59_8

Not on your lists

6756..7037
DNA (282bp) protein (94aa)
6756..7037 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03186.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_59_9

Not on your lists

comp(7103..9064)
DNA (1962bp) protein (654aa)
DNA polymerase III subunits gamma/tau (EC:2.7.7.7)
DNA polymerase III subunits gamma/tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Thermincola sp. JR RepID=D5X8W4_9FIRM (db=UNIREF evalue=4.0e-94 bit_score=349.0 identity=46.39 coverage=54.1284403669725)
seg (db=Seg db_id=seg from=411 to=431)
ACD20_59_10

Not on your lists

9269..10222
DNA (954bp) protein (318aa)
ldcA; Muramoyltetrapeptide carboxypeptidase
Peptidase_S66 (db=HMMPfam db_id=PF02016 from=18 to=299 evalue=1.3e-91 interpro_id=IPR003507 interpro_description=Peptidase S66, LD-carboxypeptidase A)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=3 to=173 evalue=2.1e-52)
LD-carboxypeptidase A C-terminal domain-like (db=superfamily db_id=SSF141986 from=146 to=309 evalue=2.6e-40)
ACD20_59_11

Not on your lists

comp(10294..10437)
DNA (144bp) protein (48aa)
10294..10437 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03189.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_59_12

Not on your lists

comp(10729..12366)
DNA (1638bp) protein (546aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=315 to=332)
transmembrane_regions (db=TMHMM db_id=tmhmm from=349 to=366)
transmembrane_regions (db=TMHMM db_id=tmhmm from=449 to=471)
transmembrane_regions (db=TMHMM db_id=tmhmm from=483 to=500)
ACD20_59_13

Not on your lists

comp(12369..14573)
DNA (2205bp) protein (735aa)
capsular exopolysaccharide family (EC:2.7.10.2)
seg (db=Seg db_id=seg from=666 to=681)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=423 to=445)
ACD20_59_14

Not on your lists

comp(14629..15762)
DNA (1134bp) protein (378aa)
polysaccharide export protein
Poly_export (db=HMMPfam db_id=PF02563 from=48 to=122 evalue=3.7e-17 interpro_id=IPR003715 interpro_description=Polysaccharide export protein GO=Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159), Biological Process: polysaccharide transport (GO:0015774), Cellular Component: membrane (GO:0016020))
Uncharacterized protein {ECO:0000313|EMBL:EKE03192.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
polysaccharide export protein; K01991 polysaccharide export outer membrane protein alias=ACD20_3620.49982.14G0014,ACD20_3620.49982.14_14,ACD20_C00059G00014 id=19356 tax=ACD20 species=Cyanothece sp. PCC 7425 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_59_15

Not on your lists

16134..16346
DNA (213bp) protein (71aa)
16134..16346 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03193.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_59_16

Not on your lists

16415..17062
DNA (648bp) protein (216aa)
dienelactone hydrolase
seg (db=Seg db_id=seg from=112 to=127)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=5 to=213 evalue=6.2e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=33 to=211 evalue=2.4e-12)
ACD20_59_17

Not on your lists

comp(17085..17657)
DNA (573bp) protein (191aa)
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QXG8_9FIRM (db=UNIREF evalue=1.0e-29 bit_score=132.0 identity=34.22 coverage=90.5759162303665)
CobU (db=HMMPfam db_id=PF02283 from=5 to=173 evalue=6.0e-46 interpro_id=IPR003203 interpro_description=Cobinamide kinase/cobinamide phosphate guanyltransferase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: adenosylcobinamide kinase activity (GO:0043752), Molecular Function: adenosylcobinamide-phosphate guanylyltransferase activity (GO:0043753), Biological Process: cofactor biosynthetic process (GO:0051188))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=174 evalue=1.8e-39)
ACD20_59_18

Not on your lists

comp(17851..18555)
DNA (705bp) protein (235aa)
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=143 to=156)
seg (db=Seg db_id=seg from=51 to=61)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=233 evalue=1.2e-43)
ACD20_59_19

Not on your lists

18750..19565
DNA (816bp) protein (272aa)
hypothetical protein
seg (db=Seg db_id=seg from=206 to=212)
DUF1009 (db=HMMPfam db_id=PF06230 from=62 to=269 evalue=1.6e-64 interpro_id=IPR010415 interpro_description=Protein of unknown function DUF1009)
hypothetical protein; K09949 hypothetical protein alias=ACD20_3620.49982.14G0019,ACD20_3620.49982.14_19,ACD20_C00059G00019 id=19339 tax=ACD20 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_59_20

Not on your lists

19562..20725
DNA (1164bp) protein (388aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU37_9FIRM (db=UNIREF evalue=1.0e-61 bit_score=240.0 identity=34.92 coverage=95.8762886597938)
seg (db=Seg db_id=seg from=240 to=258)
seg (db=Seg db_id=seg from=294 to=306)
ACD20_59_21

Not on your lists

20722..21399
DNA (678bp) protein (226aa)
hypothetical protein
DUF374 (db=HMMPfam db_id=PF04028 from=58 to=124 evalue=7.7e-24 interpro_id=IPR007172 interpro_description=Protein of unknown function DUF374)
Q4APP0_9CHLB_Q4APP0; (db=BlastProDom db_id=PD032436 from=36 to=123 evalue=6.0e-13 interpro_id=IPR007172 interpro_description=Protein of unknown function DUF374)
Glycerol-3-phosphate (1)-acyltransferase (db=superfamily db_id=SSF69593 from=93 to=206 evalue=2.3e-08)
ACD20_59_22

Not on your lists

comp(21427..21828)
DNA (402bp) protein (134aa)
ExbD/TolR family protein
seg (db=Seg db_id=seg from=25 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ExbD (db=HMMPfam db_id=PF02472 from=10 to=131 evalue=7.9e-24 interpro_id=IPR003400 interpro_description=Biopolymer transport protein ExbD/TolR GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
ACD20_59_23

Not on your lists

comp(21861..22349)
DNA (489bp) protein (163aa)
ExbD/TolR family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ExbD (db=HMMPfam db_id=PF02472 from=10 to=129 evalue=6.2e-20 interpro_id=IPR003400 interpro_description=Biopolymer transport protein ExbD/TolR GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
ExbD/TolR family protein; K03559 biopolymer transport protein ExbD alias=ACD20_3620.49982.14G0023,ACD20_3620.49982.14_23,ACD20_C00059G00023 id=19347 tax=ACD20 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_59_24

Not on your lists

comp(22403..23065)
DNA (663bp) protein (221aa)
tolQ; biopolymer transport protein TolQ
seg (db=Seg db_id=seg from=70 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD20_59_25

Not on your lists

comp(23108..24208)
DNA (1101bp) protein (367aa)
hypothetical protein
seg (db=Seg db_id=seg from=225 to=261)
seg (db=Seg db_id=seg from=186 to=220)
seg (db=Seg db_id=seg from=147 to=159)
ACD20_59_26

Not on your lists

comp(24321..25142)
DNA (822bp) protein (274aa)
seg (db=Seg db_id=seg from=188 to=216)
seg (db=Seg db_id=seg from=49 to=81)
seg (db=Seg db_id=seg from=28 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD20_59_27

Not on your lists

comp(25229..25834)
DNA (606bp) protein (202aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKE03205.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_59_28

Not on your lists

25973..26704
DNA (732bp) protein (244aa)
putative peptidase A2A
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ASP_PROTEASE (db=PatternScan db_id=PS00141 from=144 to=155 evalue=0.0 interpro_id=IPR001969 interpro_description=Peptidase aspartic, active site GO=Molecular Function: aspartic-type endopeptidase activity (GO:0004190), Biological Process: proteolysis (GO:0006508))
Acid proteases (db=superfamily db_id=SSF50630 from=122 to=233 evalue=6.0e-14 interpro_id=IPR021109 interpro_description=Peptidase aspartic)
ACD20_59_29

Not on your lists

comp(26743..27636)
DNA (894bp) protein (298aa)
usp6; universal stress protein
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=1 to=145 evalue=4.1e-22)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=5 to=147 evalue=5.3e-22 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=155 to=296 evalue=6.0e-21)
ACD20_59_30

Not on your lists

27971..28642
DNA (672bp) protein (224aa)
nusB; transcription antitermination protein NusB
seg (db=Seg db_id=seg from=156 to=169)
seg (db=Seg db_id=seg from=3 to=14)
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=3 to=216 evalue=4.7e-41 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353))
Displaying items 1-30 of 49 in total

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