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ACD20_62

Alias: ACD20_994.24575.15

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_62_1

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2..118
DNA (117bp) protein (39aa)
2..118 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE02064.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_62_2

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comp(179..1318)
DNA (1140bp) protein (380aa)
cellulose biosynthesis protein
seg (db=Seg db_id=seg from=81 to=95)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=163 to=353 evalue=4.1e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Uncharacterized protein {ECO:0000313|EMBL:EKE02065.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_62_3

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comp(1395..1754)
DNA (360bp) protein (120aa)
seg (db=Seg db_id=seg from=15 to=26)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=81 evalue=1.4e-11 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Uncharacterized protein {ECO:0000313|EMBL:EKE02066.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_62_4

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comp(2011..3132)
DNA (1122bp) protein (374aa)
protein of unknown function
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=163 to=335 evalue=1.0e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=171 to=337 evalue=0.00077 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Uncharacterized protein {ECO:0000313|EMBL:EKE02067.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_62_5

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comp(3387..4139)
DNA (753bp) protein (251aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=1 to=235 evalue=4.0e-34 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=1 to=235 evalue=8.1e-34 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
His_biosynth (db=HMMPfam db_id=PF00977 from=2 to=225 evalue=3.0e-33 interpro_id=IPR006062 interpro_description=Histidine biosynthesis GO=Biological Process: histidine biosynthetic process (GO:0000105))
ACD20_62_6

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comp(4274..4768)
DNA (495bp) protein (165aa)
benzodiazepine receptor TspO
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
ACD20_62_7

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5006..5893
DNA (888bp) protein (296aa)
hypothetical protein
TPR-like (db=superfamily db_id=SSF48452 from=8 to=295 evalue=1.3e-62)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=76 to=295 evalue=1.5e-62 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=1 to=292 evalue=1.2e-50)
ACD20_62_8

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6115..6606
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9B1_9BURK (db=UNIREF evalue=8.0e-15 bit_score=82.8 identity=27.91 coverage=78.0487804878049)
hypothetical protein
CNMP_BINDING_1 (db=PatternScan db_id=PS00888 from=47 to=63 evalue=0.0 interpro_id=IPR018488 interpro_description=Cyclic nucleotide-binding, conserved site)
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=12 to=142 evalue=5.7e-31 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
ACD20_62_9

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6902..7681
DNA (780bp) protein (260aa)
glucose-1-phosphate cytidylyltransferase
glucose-1-phosphate cytidylyltransferase
Glucose-1-phosphate cytidylyltransferase n=3 Tax=Campylobacter jejuni RepID=A3YS32_CAMJE (db=UNIREF evalue=9.0e-102 bit_score=373.0 identity=66.54 coverage=98.4615384615385)
G1P_cyt_trans: glucose-1-phosphate cyti (db=HMMTigr db_id=TIGR02623 from=1 to=257 evalue=3.8e-154 interpro_id=IPR013446 interpro_description=Glucose-1-phosphate cytidylyltransferase)
ACD20_62_10

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7684..8742
DNA (1059bp) protein (353aa)
rfbG; CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
rfbG; CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4,6-dehydratase n=1 Tax=Persephonella marina EX-H1 RepID=C0QSV2_PERMH (db=UNIREF evalue=1.0e-103 bit_score=380.0 identity=55.84 coverage=96.8838526912181)
seg (db=Seg db_id=seg from=233 to=247)
ACD20_62_11

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8726..10087
DNA (1362bp) protein (454aa)
DegT/DnrJ/EryC1/StrS aminotransferase family enzyme rbh
DegT/DnrJ/EryC1/StrS aminotransferase family enzyme rbh
DegT/DnrJ/EryC1/StrS aminotransferase family enzyme n=1 Tax=Persephonella marina EX-H1 RepID=C0QSV3_PERMH (db=UNIREF evalue=0.0 bit_score=659.0 identity=72.27 coverage=92.7312775330396)
seg (db=Seg db_id=seg from=14 to=25)
rfbH to make CDP sugar Jill Banfield (11/15/12)
ACD20_62_12

Not on your lists

10213..11247
DNA (1035bp) protein (345aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJR4_ALKOO (db=UNIREF evalue=2.0e-120 bit_score=436.0 identity=65.05 coverage=93.3333333333333)
polysaccharide biosynthesis protein CapD
polysaccharide biosynthesis protein CapD
PseB: UDP-N-acetylglucosamine 4,6-dehydratas (db=HMMTigr db_id=TIGR03589 from=1 to=327 evalue=1.3e-233 interpro_id=IPR020025 interpro_description=Pseudaminic acid biosynthesis, PseB)
ACD20_62_13

Not on your lists

11195..12352
DNA (1158bp) protein (386aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase (EC:2.6.1.50)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase n=3 Tax=Clostridium thermocellum RepID=A3DHJ4_CLOTH (db=UNIREF evalue=2.0e-109 bit_score=399.0 identity=52.37 coverage=97.6683937823834)
PseC: UDP-4-keto-6-deoxy-N-acetylglucosamine (db=HMMTigr db_id=TIGR03588 from=9 to=384 evalue=8.3e-212 interpro_id=IPR020026 interpro_description=Pseudaminic acid biosynthesis, PseC)
ACD20_62_14

Not on your lists

12349..13056
DNA (708bp) protein (236aa)
acylneuraminate cytidylyltransferase
PseF: pseudaminic acid CMP-transferase (db=HMMTigr db_id=TIGR03584 from=4 to=225 evalue=1.4e-115 interpro_id=IPR020039 interpro_description=Pseudaminic acid biosynthesis, PseF)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=223 evalue=9.3e-63)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=231 evalue=1.8e-48)
ACD20_62_15

Not on your lists

13046..13663
DNA (618bp) protein (206aa)
pseudaminic acid biosynthesis-associated methylase
Pse_Me-ase: pseudaminic acid biosynthesis- (db=HMMTigr db_id=TIGR03587 from=3 to=205 evalue=1.4e-98 interpro_id=IPR020027 interpro_description=Pseudaminic acid biosynthesis-associated methyltransferase)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=204 evalue=1.3e-12)
pseudaminic acid biosynthesis-associated methylase alias=ACD20_C00062G00015,ACD20_994.24575.15G0015,ACD20_994.24575.15_15 id=19418 tax=ACD20 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_62_16

Not on your lists

13639..14418
DNA (780bp) protein (260aa)
AP endonuclease
AP endonuclease, family 2 n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RR50_CAMFF (db=UNIREF evalue=1.0e-52 bit_score=210.0 identity=48.16 coverage=91.1538461538461)
seg (db=Seg db_id=seg from=225 to=236)
Xylose isomerase-like (db=superfamily db_id=SSF51658 from=8 to=259 evalue=4.7e-23 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
ACD20_62_17

Not on your lists

14429..15475
DNA (1047bp) protein (349aa)
hypothetical protein CLOSPO_02299 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI000179438E (db=UNIREF evalue=1.0e-83 bit_score=313.0 identity=48.56 coverage=98.2808022922636)
sialic acid synthase (EC:2.5.1.56)
SIALIC ACID SYNTHASE-RELATED (db=HMMPanther db_id=PTHR23416 from=11 to=347 evalue=7.2e-99)
ACD20_62_18

Not on your lists

15472..16152
DNA (681bp) protein (227aa)
formyltransferase
Putative uncharacterized protein n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HPH6_CAMUP (db=UNIREF evalue=4.0e-13 bit_score=78.2 identity=32.37 coverage=59.4713656387665)
seg (db=Seg db_id=seg from=52 to=64)
Formyltransferase (db=superfamily db_id=SSF53328 from=41 to=163 evalue=7.2e-19 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD20_62_19

Not on your lists

16136..17149
DNA (1014bp) protein (338aa)
DegT/DnrJ/EryC1/StrS aminotransferase
seg (db=Seg db_id=seg from=59 to=70)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=337 evalue=6.8e-60 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
DegT_DnrJ_EryC1 (db=HMMPfam db_id=PF01041 from=9 to=334 evalue=5.6e-58 interpro_id=IPR000653 interpro_description=DegT/DnrJ/EryC1/StrS aminotransferase)
ACD20_62_20

Not on your lists

17146..17826
DNA (681bp) protein (227aa)
hypothetical protein
WbqC-like family protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDH3_ACIB4 (db=UNIREF evalue=6.0e-49 bit_score=197.0 identity=41.4 coverage=93.3920704845815)
WbqC (db=HMMPfam db_id=PF08889 from=7 to=218 evalue=3.8e-73 interpro_id=IPR014985 interpro_description=WbqC-like protein family)
WbqC-like protein family protein {ECO:0000313|EMBL:EKE02083.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_62_21

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17828..18493
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG7F19 RepID=B3T9M9_9ARCH (db=UNIREF evalue=2.0e-52 bit_score=209.0 identity=50.23 coverage=98.6486486486486)
methyltransferase type 11 (db=KEGG evalue=7.0e-11 bit_score=70.9 identity=27.23 coverage=91.8918918918919)
seg (db=Seg db_id=seg from=129 to=139)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=7 to=206 evalue=1.7e-21)
ACD20_62_22

Not on your lists

18497..19186
DNA (690bp) protein (230aa)
LmbE family protein
seg (db=Seg db_id=seg from=96 to=106)
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
LmbE-like (db=superfamily db_id=SSF102588 from=1 to=225 evalue=2.6e-46)
ACD20_62_23

Not on your lists

19340..20731
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVX3_9BACT (db=UNIREF evalue=1.0e-168 bit_score=596.0 identity=58.1 coverage=99.5689655172414)
radical SAM protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=152 to=406 evalue=8.6e-35)
ACD20_62_24

Not on your lists

20777..21751
DNA (975bp) protein (325aa)
glycosyltransferase
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=5 to=246 evalue=6.6e-52)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=5 to=246 evalue=7.3e-52)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=7 to=165 evalue=6.0e-33 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD20_62_25

Not on your lists

comp(21808..22962)
DNA (1155bp) protein (385aa)
methyltransferase (EC:2.1.1.-)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=18 to=162 evalue=1.3e-18)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=51 to=137 evalue=4.4e-10)
ARSENITE METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108:SF11 from=51 to=131 evalue=2.0e-06)
ACD20_62_26

Not on your lists

comp(23055..24437)
DNA (1383bp) protein (461aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=182 to=217 evalue=NA)
capsule polysaccharide biosynthesis protein alias=ACD20_C00062G00026,ACD20_994.24575.15G0026,ACD20_994.24575.15_26 id=19409 tax=ACD20 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Capsule polysaccharide biosynthesis protein {ECO:0000313|EMBL:EKE02089.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 26 items

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