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ACD20_64

Alias: ACD20_347.30611.14

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_64_1

Not on your lists

comp(45..236)
DNA (192bp) protein (64aa)
seg (db=Seg db_id=seg from=18 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Flp_Fap (db=HMMPfam db_id=PF04964 from=14 to=47 evalue=2.6e-08 interpro_id=IPR007047 interpro_description=Flp/Fap pilin component)
Uncharacterized protein {ECO:0000313|EMBL:EKE03257.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_2

Not on your lists

comp(284..508)
DNA (225bp) protein (75aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
seg (db=Seg db_id=seg from=63 to=74)
Flp_Fap (db=HMMPfam db_id=PF04964 from=22 to=63 evalue=8.9e-07 interpro_id=IPR007047 interpro_description=Flp/Fap pilin component)
Uncharacterized protein {ECO:0000313|EMBL:EKE03258.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_3

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comp(593..1780)
DNA (1188bp) protein (396aa)
Aminotransferase, classes I and II superfamily n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK69_9CYAN (db=UNIREF evalue=2.0e-121 bit_score=439.0 identity=51.41 coverage=97.979797979798)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=241 to=254 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD20_64_4

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comp(1851..2852)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNT9_9FIRM (db=UNIREF evalue=4.0e-19 bit_score=99.0 identity=25.51 coverage=91.9161676646707)
hypothetical protein
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=3 to=325 evalue=3.8e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKE03260.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_5

Not on your lists

3287..3676
DNA (390bp) protein (130aa)
coiled-coil (db=Coil db_id=coil from=64 to=96 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
DivIC (db=HMMPfam db_id=PF04977 from=42 to=119 evalue=5.7e-11 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
Uncharacterized protein {ECO:0000313|EMBL:EKE03261.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_6

Not on your lists

comp(3795..3950)
DNA (156bp) protein (52aa)
seg (db=Seg db_id=seg from=21 to=36)
Uncharacterized protein {ECO:0000313|EMBL:EKE03262.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_7

Not on your lists

4280..5563
DNA (1284bp) protein (428aa)
FAD linked oxidase domain-containing protein
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE11_CHIPD (db=UNIREF evalue=9.0e-86 bit_score=321.0 identity=41.96 coverage=96.7289719626168)
seg (db=Seg db_id=seg from=255 to=271)
ACD20_64_8

Not on your lists

5565..6293
DNA (729bp) protein (243aa)
short chain dehydrogenase
ADH_SHORT (db=PatternScan db_id=PS00061 from=135 to=163 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=4 to=188 evalue=5.5e-31 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
3-OXOACYL-(ACYL CARRIER PROTEIN) REDUCTASE (db=HMMPanther db_id=PTHR19410:SF23 from=4 to=188 evalue=5.5e-31)
ACD20_64_9

Not on your lists


comp(6356..6619)
DNA (264bp) protein (88aa)
rpsO; 30S ribosomal protein S15
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=37 to=67 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S15_bact: ribosomal protein S15 (db=HMMTigr db_id=TIGR00952 from=2 to=87 evalue=4.3e-53 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR (db=HMMPanther db_id=PTHR23321 from=2 to=86 evalue=5.8e-47)
ACD20_64_10

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6933..8387
DNA (1455bp) protein (485aa)
glutamyl-tRNA synthetase
glutamyl-tRNA synthetase
Glutamyl-tRNA synthetase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=SYE_CARHZ (db=UNIREF evalue=3.0e-123 bit_score=446.0 identity=49.16 coverage=96.701030927835)
seg (db=Seg db_id=seg from=113 to=127)
ACD20_64_11

Not on your lists

8418..9920
DNA (1503bp) protein (501aa)
cysteinyl-tRNA synthetase
cysteinyl-tRNA synthetase
Cysteinyl-tRNA synthetase n=6 Tax=Geobacillus RepID=SYC_GEOTN (db=UNIREF evalue=3.0e-128 bit_score=462.0 identity=46.57 coverage=91.2175648702595)
coiled-coil (db=Coil db_id=coil from=308 to=336 evalue=NA)
ACD20_64_12

Not on your lists

9984..10370
DNA (387bp) protein (129aa)
hypothetical protein
RNase III domain-like (db=superfamily db_id=SSF69065 from=1 to=120 evalue=1.9e-23 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
Predicted inactive ribonuclease III homolog (db=HMMPIR db_id=PIRSF005520 from=1 to=125 evalue=1.7e-21 interpro_id=IPR008226 interpro_description=Uncharacterised conserved protein UCP005520)
Ribonuclease_3 (db=HMMPfam db_id=PF00636 from=10 to=102 evalue=1.7e-06 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
ACD20_64_13

Not on your lists

comp(10533..11426)
DNA (894bp) protein (298aa)
stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
seg (db=Seg db_id=seg from=25 to=36)
seg (db=Seg db_id=seg from=239 to=259)
ACD20_64_14

Not on your lists

comp(11511..12848)
DNA (1338bp) protein (446aa)
sun protein
sun protein
Sun protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FS79_DESHD (db=UNIREF evalue=6.0e-87 bit_score=325.0 identity=38.17 coverage=98.8789237668161)
rsmB: ribosomal RNA small subunit methyltran (db=HMMTigr db_id=TIGR00563 from=4 to=444 evalue=9.5e-91 interpro_id=IPR004573 interpro_description=Fmu, rRNA SAM-dependent methyltransferase GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA methyltransferase activity (GO:0008649))
ACD20_64_15

Not on your lists

13106..13873
DNA (768bp) protein (256aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Glycosyl transferase CpsE n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RXC2_9FIRM (db=UNIREF evalue=1.0e-51 bit_score=206.0 identity=50.0 coverage=77.734375)
seg (db=Seg db_id=seg from=74 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=87)
ACD20_64_16

Not on your lists

13939..15132
DNA (1194bp) protein (398aa)
hypothetical protein
Polysaccharide export protein n=3 Tax=Arthrospira RepID=B5W298_SPIMA (db=UNIREF evalue=4.0e-29 bit_score=132.0 identity=31.29 coverage=75.1256281407035)
seg (db=Seg db_id=seg from=7 to=17)
Poly_export (db=HMMPfam db_id=PF02563 from=75 to=151 evalue=4.8e-16 interpro_id=IPR003715 interpro_description=Polysaccharide export protein GO=Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159), Biological Process: polysaccharide transport (GO:0015774), Cellular Component: membrane (GO:0016020))
ACD20_64_17

Not on your lists

15169..17367
DNA (2199bp) protein (733aa)
capsular exopolysaccharide biosynthesis protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=428 to=450)
seg (db=Seg db_id=seg from=11 to=31)
seg (db=Seg db_id=seg from=268 to=278)
ACD20_64_18

Not on your lists

17647..19029
DNA (1383bp) protein (461aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=281 to=303)
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
transmembrane_regions (db=TMHMM db_id=tmhmm from=404 to=422)
seg (db=Seg db_id=seg from=30 to=51)
ACD20_64_19

Not on your lists

19087..20601
DNA (1515bp) protein (505aa)
Lipopolysaccharide biosynthesis protein WzxC
transmembrane_regions (db=TMHMM db_id=tmhmm from=327 to=344)
transmembrane_regions (db=TMHMM db_id=tmhmm from=384 to=406)
transmembrane_regions (db=TMHMM db_id=tmhmm from=416 to=438)
ACD20_64_20

Not on your lists

20573..21694
DNA (1122bp) protein (374aa)
group 1 glycosyl transferase (EC:2.4.1.57)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=11 to=371 evalue=2.9e-78)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF10 from=11 to=371 evalue=2.9e-78)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=10 to=371 evalue=6.1e-52)
ACD20_64_21

Not on your lists

21839..22702
DNA (864bp) protein (288aa)
hypothetical protein
NodS n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IZV4_RHOP2 (db=UNIREF evalue=1.0e-13 bit_score=80.5 identity=31.47 coverage=48.6111111111111)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=31 to=285 evalue=1.2e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=71 to=238 evalue=4.2e-16)
ACD20_64_22

Not on your lists

comp(22779..23303)
DNA (525bp) protein (175aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE03278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_23

Not on your lists

comp(23417..24154)
DNA (738bp) protein (246aa)
hypothetical protein
von Willebrand factor type A n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRJ3_ROSCS (db=UNIREF evalue=3.0e-27 bit_score=125.0 identity=35.45 coverage=83.739837398374)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
vWA-like (db=superfamily db_id=SSF53300 from=41 to=233 evalue=3.6e-20)
ACD20_64_24

Not on your lists

24243..24875
DNA (633bp) protein (211aa)
Nitroreductase family protein n=1 Tax=Turicibacter sp. PC909 RepID=D4W7E9_9FIRM (db=UNIREF evalue=3.0e-28 bit_score=127.0 identity=35.55 coverage=98.5781990521327)
nitroreductase
FMN-dependent nitroreductase-like (db=superfamily db_id=SSF55469 from=1 to=208 evalue=5.4e-43 interpro_id=IPR000415 interpro_description=Nitroreductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
Nitroreductase (db=HMMPfam db_id=PF00881 from=7 to=187 evalue=2.3e-33 interpro_id=IPR000415 interpro_description=Nitroreductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
ACD20_64_25

Not on your lists

comp(25074..25235)
DNA (162bp) protein (54aa)
25074..25235 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03281.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_26

Not on your lists

comp(25427..26293)
DNA (867bp) protein (289aa)
25427..26293 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03282.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_27

Not on your lists

26487..26972
DNA (486bp) protein (162aa)
SprA-related (db=HMMPfam db_id=PF12118 from=47 to=139 evalue=6.5e-08 interpro_id=IPR021973 interpro_description=SprA-related family)
Uncharacterized protein {ECO:0000313|EMBL:EKE03283.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_64_28

Not on your lists

27138..27752
DNA (615bp) protein (205aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
no description (db=Gene3D db_id=G3DSA:3.40.50.1950 from=5 to=203 evalue=3.1e-58 interpro_id=IPR003382 interpro_description=Flavoprotein GO=Molecular Function: catalytic activity (GO:0003824))
ubiX_pad: polyprenyl P-hydroxybenzoate and p (db=HMMTigr db_id=TIGR00421 from=6 to=202 evalue=3.4e-58 interpro_id=IPR004507 interpro_description=Phenylacrylic acid decarboxylase GO=Molecular Function: carboxy-lyase activity (GO:0016831))
cytoplasmic kelly wrighton (11/15/12)
ACD20_64_29

Not on your lists

27749..28288
DNA (540bp) protein (180aa)
hypothetical protein; K13273 phosphomevalonate kinase [EC:2.7.4.2] (db=KEGG evalue=8.0e-11 bit_score=69.7 identity=30.98 coverage=93.3333333333333)
seg (db=Seg db_id=seg from=41 to=49)
P-mevalo_kinase (db=HMMPfam db_id=PF04275 from=9 to=108 evalue=2.6e-15 interpro_id=IPR005919 interpro_description=Higher eukaryotic phosphomevalonate kinase GO=Molecular Function: phosphomevalonate kinase activity (GO:0004631), Cellular Component: cytoplasm (GO:0005737), Biological Process: cholesterol biosynthetic process (GO:0006695))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=170 evalue=4.4e-12)
ACD20_64_30

Not on your lists

28473..29828
DNA (1356bp) protein (452aa)
seg (db=Seg db_id=seg from=61 to=107)
seg (db=Seg db_id=seg from=277 to=289)
Uncharacterized protein {ECO:0000313|EMBL:EKE03286.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
autotransporter
Displaying items 1-30 of 31 in total

View Taxonomy