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ACD20_71

Alias: ACD20_2792.21729.15

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_71_1

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277..1989
DNA (1713bp) protein (571aa)
hypothetical protein
hypothetical protein
Carboxypeptidase Taq n=1 Tax=Geobacillus sp. Y412MC10 RepID=D3E8P3_GEOS4 (db=UNIREF evalue=6.0e-104 bit_score=382.0 identity=41.11 coverage=87.3905429071804)
seg (db=Seg db_id=seg from=6 to=27)
ACD20_71_2

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2171..4084
DNA (1914bp) protein (638aa)
hypothetical protein (db=KEGG evalue=1.0e-28 bit_score=131.0 identity=25.18 coverage=79.9373040752351)
seg (db=Seg db_id=seg from=125 to=138)
seg (db=Seg db_id=seg from=504 to=515)
Uncharacterized protein {ECO:0000313|EMBL:EKE03643.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_3

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comp(4426..5898)
DNA (1473bp) protein (491aa)
integral membrane sensor signal transduction histidine kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
seg (db=Seg db_id=seg from=317 to=335)
ACD20_71_4

Not on your lists

comp(5870..6562)
DNA (693bp) protein (231aa)
phoB; winged-helix phosphate transcriptional response regulator
seg (db=Seg db_id=seg from=6 to=19)
seg (db=Seg db_id=seg from=93 to=106)
no description (db=HMMSmart db_id=SM00448 from=4 to=119 evalue=7.6e-44 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD20_71_5

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comp(6795..7841)
DNA (1047bp) protein (349aa)
hypothetical protein
seg (db=Seg db_id=seg from=52 to=62)
hypothetical protein alias=ACD20_2792.21729.15G0005,ACD20_C00071G00005,ACD20_2792.21729.15_5 id=19565 tax=ACD20 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE03646.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_6

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8117..9256
DNA (1140bp) protein (380aa)
alanine dehydrogenase (EC:1.4.1.1) rbh
alanine dehydrogenase (EC:1.4.1.1) rbh
L-alanine dehydrogenase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8G7_DESRM (db=UNIREF evalue=7.0e-135 bit_score=483.0 identity=73.85 coverage=97.3684210526316)
seg (db=Seg db_id=seg from=95 to=108)
ACD20_71_7

Not on your lists

10992..12242
DNA (1251bp) protein (417aa)
seg (db=Seg db_id=seg from=314 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=231 to=252 evalue=NA)
MCE (db=HMMPfam db_id=PF02470 from=55 to=111 evalue=1.9e-06 interpro_id=IPR003399 interpro_description=Mammalian cell entry related)
ACD20_71_8

Not on your lists

comp(12258..13301)
DNA (1044bp) protein (348aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKE03628.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_9

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13518..14021
DNA (504bp) protein (168aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
seg (db=Seg db_id=seg from=118 to=149)
Uncharacterized protein {ECO:0000313|EMBL:EKE03629.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_10

Not on your lists

comp(14029..14412)
DNA (384bp) protein (128aa)
MerR family transcriptional regulator
HTH_MERR_1 (db=PatternScan db_id=PS00552 from=13 to=35 evalue=0.0 interpro_id=IPR000551 interpro_description=HTH transcriptional regulator, MerR GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=9 to=114 evalue=3.0e-14 interpro_id=IPR009061 interpro_description=Putative DNA binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
no description (db=HMMSmart db_id=SM00422 from=10 to=78 evalue=1.1e-12 interpro_id=IPR000551 interpro_description=HTH transcriptional regulator, MerR GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD20_71_11

Not on your lists

14529..14891
DNA (363bp) protein (121aa)
dinitrogenase iron-molybdenum cofactor biosynthesis
seg (db=Seg db_id=seg from=47 to=57)
Nitrogenase accessory factor-like (db=superfamily db_id=SSF53146 from=1 to=119 evalue=2.9e-34 interpro_id=IPR003731 interpro_description=Dinitrogenase iron-molybdenum cofactor biosynthesis)
no description (db=Gene3D db_id=G3DSA:3.30.420.130 from=1 to=109 evalue=1.6e-31 interpro_id=IPR003731 interpro_description=Dinitrogenase iron-molybdenum cofactor biosynthesis)
ACD20_71_12

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14930..15226
DNA (297bp) protein (99aa)
hypothetical protein
seg (db=Seg db_id=seg from=36 to=48)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
coiled-coil (db=Coil db_id=coil from=62 to=97 evalue=NA)
ACD20_71_13

Not on your lists

15248..16117
DNA (870bp) protein (290aa)
cobyrinic acid ac-diamide synthase
seg (db=Seg db_id=seg from=4 to=17)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=99 to=110 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=70 to=81 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD20_71_14

Not on your lists

16114..16980
DNA (867bp) protein (289aa)
cobyrinic acid ac-diamide synthase
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=94 to=105 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=286 evalue=4.9e-32)
CbiA (db=HMMPfam db_id=PF01656 from=4 to=252 evalue=9.0e-28 interpro_id=IPR002586 interpro_description=Cobyrinic acid a,c-diamide synthase)
ACD20_71_15

Not on your lists

16982..18178
DNA (1197bp) protein (399aa)
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BY95_DESAD (db=UNIREF evalue=2.0e-113 bit_score=412.0 identity=52.54 coverage=94.9874686716792)
seg (db=Seg db_id=seg from=30 to=43)
ACD20_71_16

Not on your lists

comp(18217..18381)
DNA (165bp) protein (55aa)
coiled-coil (db=Coil db_id=coil from=7 to=38 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE03636.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_17

Not on your lists

comp(18444..19199)
DNA (756bp) protein (252aa)
hypothetical protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=240 evalue=5.4e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=9 to=242 evalue=1.5e-20)
VALACYCLOVIR HYDROLASE (db=HMMPanther db_id=PTHR10992:SF17 from=11 to=211 evalue=4.1e-11)
ACD20_71_18

Not on your lists

19392..19901
DNA (510bp) protein (170aa)
DUF830 (db=HMMPfam db_id=PF05708 from=8 to=150 evalue=5.7e-08)
Uncharacterized protein {ECO:0000313|EMBL:EKE03638.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_19

Not on your lists

comp(19898..20689)
DNA (792bp) protein (264aa)
19898..20689 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03639.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_20

Not on your lists

20943..21257
DNA (315bp) protein (105aa)
hypothetical protein
seg (db=Seg db_id=seg from=54 to=65)
hypothetical protein alias=ACD20_C00071G00020,ACD20_2792.21729.15G0020,ACD20_2792.21729.15_20 id=19571 tax=ACD20 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE03640.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_71_21

Not on your lists

21673..21765
DNA (93bp) protein (31aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:EKE03641.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 21 items

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