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ACD20_77

Alias: ACD20_5277.46502.14

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_77_1

Not on your lists

652..1821
DNA (1170bp) protein (390aa)
seg (db=Seg db_id=seg from=320 to=347)
seg (db=Seg db_id=seg from=148 to=159)
seg (db=Seg db_id=seg from=19 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD20_77_2

Not on your lists

2375..3334
DNA (960bp) protein (320aa)
fmt; methionyl-tRNA formyltransferase
Formyltransferase (db=superfamily db_id=SSF53328 from=2 to=211 evalue=4.6e-47 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
METHIONYL-TRNA FORMYLTRANSFERASE (db=HMMPanther db_id=PTHR11138 from=70 to=245 evalue=1.0e-44 interpro_id=IPR015518 interpro_description=Methionine tRNA Formyltransferase-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=2 to=210 evalue=1.5e-42 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD20_77_3

Not on your lists

3720..5738
DNA (2019bp) protein (673aa)
Glycosidases
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=93 to=583 evalue=4.1e-93 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
no description (db=Gene3D db_id=G3DSA:3.20.20.80 from=92 to=581 evalue=4.9e-87 interpro_id=IPR013781 interpro_description=Glycoside hydrolase, subgroup, catalytic core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
no description (db=HMMSmart db_id=SM00642 from=104 to=575 evalue=7.5e-84 interpro_id=IPR006589 interpro_description=Glycosyl hydrolase, family 13, subfamily, catalytic domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
ACD20_77_4

Not on your lists

5940..6572
DNA (633bp) protein (211aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=14 to=33)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=6 to=29 evalue=0.014 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKE02869.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_5

Not on your lists

6591..7220
DNA (630bp) protein (210aa)
seg (db=Seg db_id=seg from=2 to=11)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
seg (db=Seg db_id=seg from=22 to=41)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=11 to=34 evalue=0.0094 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD20_77_6

Not on your lists

comp(7355..8308)
DNA (954bp) protein (318aa)
glucokinase
seg (db=Seg db_id=seg from=302 to=312)
seg (db=Seg db_id=seg from=132 to=158)
ROK (db=PatternScan db_id=PS01125 from=137 to=164 evalue=0.0 interpro_id=IPR000600 interpro_description=ROK)
ACD20_77_7

Not on your lists

comp(8417..9109)
DNA (693bp) protein (231aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase
seg (db=Seg db_id=seg from=150 to=163)
seg (db=Seg db_id=seg from=39 to=50)
seg (db=Seg db_id=seg from=4 to=13)
ACD20_77_8

Not on your lists

9477..11198
DNA (1722bp) protein (574aa)
1,4-alpha-glucan branching protein
1,4-alpha-glucan branching protein
Glycosyl hydrolase, family 57 n=1 Tax=Thermococcus barophilus MP RepID=B5IVF9_9EURY (db=UNIREF evalue=2.0e-119 bit_score=433.0 identity=40.88 coverage=95.2961672473868)
seg (db=Seg db_id=seg from=236 to=250)
ACD20_77_9

Not on your lists

comp(11323..12267)
DNA (945bp) protein (315aa)
cation diffusion facilitator family transporter
seg (db=Seg db_id=seg from=86 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
ACD20_77_10

Not on your lists

12455..12700
DNA (246bp) protein (82aa)
12455..12700 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02875.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_11

Not on your lists

12745..13185
DNA (441bp) protein (147aa)
coiled-coil (db=Coil db_id=coil from=64 to=85 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE02876.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_12

Not on your lists

13217..13711
DNA (495bp) protein (165aa)
13217..13711 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02877.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_13

Not on your lists

comp(13777..14820)
DNA (1044bp) protein (348aa)
secF; preprotein translocase subunit SecF
SecD/SecF/SecDF export membrane protein:SecF protein n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C2U0_CROWT (db=UNIREF evalue=3.0e-58 bit_score=229.0 identity=43.54 coverage=86.2068965517241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=221)
ACD20_77_14

Not on your lists

comp(14863..16170)
DNA (1308bp) protein (436aa)
secD; protein-export membrane protein SecD
secD; protein-export membrane protein SecD
Protein-export membrane protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDR6_GLOVI (db=UNIREF evalue=4.0e-96 bit_score=355.0 identity=46.78 coverage=94.0366972477064)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
ACD20_77_15

Not on your lists

16400..16735
DNA (336bp) protein (112aa)
rhodanese-like protein
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=1 to=102 evalue=5.4e-22 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=HMMSmart db_id=SM00450 from=3 to=99 evalue=2.9e-17 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=Gene3D db_id=G3DSA:3.40.250.10 from=16 to=102 evalue=3.4e-15 interpro_id=IPR001763 interpro_description=Rhodanese-like)
ACD20_77_16

Not on your lists

17817..18947
DNA (1131bp) protein (377aa)
twitching motility protein
twitching motility protein
T2SP_E (db=PatternScan db_id=PS00662 from=210 to=224 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
pilT_fam: twitching motility protein (db=HMMTigr db_id=TIGR01420 from=19 to=361 evalue=8.0e-162 interpro_id=IPR006321 interpro_description=Pilus retraction protein PilT GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
ACD20_77_17

Not on your lists

comp(19005..19949)
DNA (945bp) protein (315aa)
coiled-coil (db=Coil db_id=coil from=35 to=56 evalue=NA)
seg (db=Seg db_id=seg from=41 to=54)
seg (db=Seg db_id=seg from=81 to=98)
seg (db=Seg db_id=seg from=221 to=232)
ACD20_77_18

Not on your lists

comp(20001..20162)
DNA (162bp) protein (54aa)
20001..20162 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02883.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_19

Not on your lists

comp(20377..20856)
DNA (480bp) protein (160aa)
seg (db=Seg db_id=seg from=113 to=126)
seg (db=Seg db_id=seg from=2 to=7)
coiled-coil (db=Coil db_id=coil from=130 to=158 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE02884.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_20

Not on your lists

comp(21266..21595)
DNA (330bp) protein (110aa)
seg (db=Seg db_id=seg from=30 to=43)
Uncharacterized protein {ECO:0000313|EMBL:EKE02885.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_21

Not on your lists

22053..25028
DNA (2976bp) protein (992aa)
two-component hybrid histidine kinase
seg (db=Seg db_id=seg from=949 to=960)
seg (db=Seg db_id=seg from=575 to=588)
seg (db=Seg db_id=seg from=921 to=937)
ACD20_77_22

Not on your lists

comp(25025..26470)
DNA (1446bp) protein (482aa)
Pyruvate kinase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B3G7_9CHRO (db=UNIREF evalue=2.0e-115 bit_score=419.0 identity=44.92 coverage=96.4730290456432)
pyruvate kinase (EC:2.7.1.40)
pyruvate kinase (EC:2.7.1.40)
PYRUVATE_KINASE (db=PatternScan db_id=PS00110 from=214 to=226 evalue=0.0 interpro_id=IPR018209 interpro_description=Pyruvate kinase, active site)
ACD20_77_23

Not on your lists

26603..27859
DNA (1257bp) protein (419aa)
amidohydrolase
seg (db=Seg db_id=seg from=347 to=356)
coiled-coil (db=Coil db_id=coil from=144 to=172 evalue=NA)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=58 to=369 evalue=1.0e-52)
ACD20_77_24

Not on your lists

27883..30489
DNA (2607bp) protein (869aa)
peptidase M16 domain-containing protein
peptidase M16 domain-containing protein
Peptidase M16 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B202_HERA2 (db=UNIREF evalue=4.0e-113 bit_score=413.0 identity=31.58 coverage=98.7341772151899)
seg (db=Seg db_id=seg from=720 to=736)
ACD20_77_25

Not on your lists

comp(30491..31120)
DNA (630bp) protein (210aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=12 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKE02890.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_77_26

Not on your lists

31321..32043
DNA (723bp) protein (241aa)
manganese/iron superoxide dismutase
seg (db=Seg db_id=seg from=186 to=197)
seg (db=Seg db_id=seg from=80 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD20_77_27

Not on your lists

comp(32266..33108)
DNA (843bp) protein (281aa)
araQ; L-arabinose transport system permease AraQ
Sugar ABC transporter n=1 Tax=Enterococcus faecalis T2 RepID=C7CZ92_ENTFA (db=UNIREF evalue=2.0e-68 bit_score=262.0 identity=48.75 coverage=98.220640569395)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=163)
seg (db=Seg db_id=seg from=149 to=159)
ACD20_77_28

Not on your lists

comp(33225..34121)
DNA (897bp) protein (299aa)
putative ABC transporter permease protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=185)
seg (db=Seg db_id=seg from=89 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
ACD20_77_29

Not on your lists

34220..35167
DNA (948bp) protein (316aa)
ADP-heptose--LPS heptosyltransferase II n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V165_9FIRM (db=UNIREF evalue=6.0e-28 bit_score=128.0 identity=28.76 coverage=95.253164556962)
glycosyl transferase family protein
seg (db=Seg db_id=seg from=161 to=177)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=302 evalue=7.3e-54)
ACD20_77_30

Not on your lists

35242..35499
DNA (258bp) protein (86aa)
35242..35499 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02895.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 38 in total

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