ggKbase home page

ACD20_78

Alias: ACD20_69856.3169.10

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_78_1
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..473)
DNA (471bp) protein (157aa)
traG; Protein TraG*
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=32)
seg (db=Seg db_id=seg from=58 to=77)
ACD20_78_2
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1003..1365)
DNA (363bp) protein (121aa)
Conjugal transfer mating pair stabilization protein TraG n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T3Z3_KLEPR (db=UNIREF evalue=1.0e-21 bit_score=105.0 identity=42.73 coverage=90.0826446280992)
TraG
TraG_N (db=HMMPfam db_id=PF07916 from=1 to=108 evalue=3.1e-27 interpro_id=IPR012931 interpro_description=TraG-like, N-terminal)
traG; conjugative transfer protein; K12056 conjugal transfer mating pair stabilization protein TraG Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
ACD20_78_3
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1352..1741)
DNA (390bp) protein (130aa)
TraG domain-containing protein
TraG_N (db=HMMPfam db_id=PF07916 from=8 to=107 evalue=1.5e-19 interpro_id=IPR012931 interpro_description=TraG-like, N-terminal)
traG; TraG protein; K12056 conjugal transfer mating pair stabilization protein TraG alias=ACD20_C00078G00003,ACD20_69856.3169.10G0003,ACD20_69856.3169.10_3 id=19691 tax=ACD20 species=Erwinia tasmaniensis genus=Erwinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
traG; protein TraG Tax=GWE2_Gammaproteobacteria_37_16_curated
ACD20_78_4

Not on your lists

comp(1738..2100)
DNA (363bp) protein (121aa)
1738..2100 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE02534.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
IncF plasmid conjugative transfer pilus assembly protein TraH
ACD20_78_5

Not on your lists

comp(2394..2849)
DNA (456bp) protein (152aa)
traH; conjugal transfer pilus assembly protein TraH
TraH (db=HMMPfam db_id=PF06122 from=2 to=128 evalue=1.4e-25 interpro_id=IPR010927 interpro_description=Type IV conjugative transfer system protein TraH)
traH; conjugal transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH alias=ACD20_C00078G00005,ACD20_69856.3169.10G0005,ACD20_69856.3169.10_5 id=19694 tax=ACD20 species=Erwinia tasmaniensis genus=Erwinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKD45257.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

View Taxonomy