ggKbase home page

ACD20_78_5

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(2394..2849)

Top 3 Functional Annotations

Value Algorithm Source
traH; conjugal transfer pilus assembly protein TraH similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 133.0
  • Bit_score: 113
  • Evalue 4.40e-23
TraH (db=HMMPfam db_id=PF06122 from=2 to=128 evalue=1.4e-25 interpro_id=IPR010927 interpro_description=Type IV conjugative transfer system protein TraH) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-25
traH; conjugal transfer pilus assembly protein TraH; K12072 conjugative transfer pilus assembly protein TraH alias=ACD20_C00078G00005,ACD20_69856.3169.10G0005,ACD20_69856.3169.10_5 id=19694 tax=ACD20 species=Erwinia tasmaniensis genus=Erwinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm similarity UNIREF
DB: UNIREF90
  • Identity: 100.0
  • Coverage: null
  • Bit_score: 317
  • Evalue 1.70e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 456
ATGAAAGCTACCCAACAACATATTTGTAGGGATTTGGGAAACTATAGTGGTAAGTTCTCAGATTGGGCTCAAGCACGCCAAAAATGTAGCGAGGATAGTGAATATAACCAAACAATGGCTAAAGCAGATGAAGATCAATACAAGCAGTATAAAAAAGCTATTCTAATCAACAAAAACCTCATCTGGGATGCTCTTGCTGTAAGCCCATACATAAAAGACCTCAAAGAGTTTTTTATGTCTTTATCGGGTACTATTGTTTATGGTACTGCAGGTAAAGTAAAGATATTTAGTCCTCTGGCCAAGGATAGAAAAGTACTCAAAGCTCTATTAGAAGGTGGAGAAGCTGAAATTTATAAATGTGATGAAGAAAAACAGTGTCTTAATCCTNNNNNNNNNNATCAACAAAAACCTCATCTGGGATGCTCTTGCTGTAAGTCCATACATAAAAGATCTTAA
PROTEIN sequence
Length: 152
MKATQQHICRDLGNYSGKFSDWAQARQKCSEDSEYNQTMAKADEDQYKQYKKAILINKNLIWDALAVSPYIKDLKEFFMSLSGTIVYGTAGKVKIFSPLAKDRKVLKALLEGGEAEIYKCDEEKQCLNPXXXXQQKPHLGCSCCKSIHKRS*