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ACD20_83

Alias: ACD20_58194.49390.14

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_83_1

Not on your lists

comp(85..1887)
DNA (1803bp) protein (601aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=18)
coiled-coil (db=Coil db_id=coil from=174 to=195 evalue=NA)
DUF187 (db=HMMPfam db_id=PF02638 from=250 to=522 evalue=4.4e-28 interpro_id=IPR003790 interpro_description=Protein of unknown function DUF187)
ACD20_83_2

Not on your lists

comp(2020..2817)
DNA (798bp) protein (266aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
seg (db=Seg db_id=seg from=5 to=18)
IMP_1 (db=PatternScan db_id=PS00629 from=83 to=96 evalue=0.0 interpro_id=IPR020583 interpro_description=Inositol monophosphatase, metal-binding site GO=Molecular Function: inositol or phosphatidylinositol phosphatase activity (GO:0004437))
Carbohydrate phosphatase (db=superfamily db_id=SSF56655 from=1 to=264 evalue=2.3e-86)
ACD20_83_3

Not on your lists

3105..3461
DNA (357bp) protein (119aa)
6-pyruvoyl tetrahydrobiopterin synthase
queuosine_QueD: queuosine biosynthesis (db=HMMTigr db_id=TIGR03367 from=3 to=96 evalue=2.9e-41)
Tetrahydrobiopterin biosynthesis enzymes-like (db=superfamily db_id=SSF55620 from=1 to=118 evalue=2.1e-40)
PTPS (db=HMMPfam db_id=PF01242 from=4 to=117 evalue=3.9e-37 interpro_id=IPR007115 interpro_description=6-pyruvoyl tetrahydropterin synthase-related GO=Molecular Function: 6-pyruvoyltetrahydropterin synthase activity (GO:0003874), Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: metal ion binding (GO:0046872))
ACD20_83_4

Not on your lists

3819..4091
DNA (273bp) protein (91aa)
3819..4091 + (rbs_motif=GGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02733.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_5

Not on your lists

4268..4900
DNA (633bp) protein (211aa)
gmk; guanylate kinase (EC:2.7.4.8)
seg (db=Seg db_id=seg from=75 to=89)
GUANYLATE_KINASE_1 (db=PatternScan db_id=PS00856 from=56 to=73 evalue=0.0 interpro_id=IPR020590 interpro_description=Guanylate kinase, conserved site)
guanyl_kin: guanylate kinase (db=HMMTigr db_id=TIGR03263 from=22 to=201 evalue=1.2e-92 interpro_id=IPR017665 interpro_description=Guanylate kinase, sub-group GO=Molecular Function: guanylate kinase activity (GO:0004385), Biological Process: purine nucleotide metabolic process (GO:0006163))
ACD20_83_6

Not on your lists

4893..5657
DNA (765bp) protein (255aa)
dinuclear metal center protein
Putative NIF3 family protein family protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LTB1_9FIRM (db=UNIREF evalue=2.0e-34 bit_score=149.0 identity=36.36 coverage=87.843137254902)
seg (db=Seg db_id=seg from=85 to=96)
seg (db=Seg db_id=seg from=226 to=243)
ACD20_83_7

Not on your lists

5642..6622
DNA (981bp) protein (327aa)
NADP-dependent oxidoreductase domain-containing protein
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=279 to=290 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
NAD(P)-linked oxidoreductase (db=superfamily db_id=SSF51430 from=8 to=275 evalue=6.9e-36 interpro_id=IPR001395 interpro_description=Aldo/keto reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.20.20.100 from=8 to=253 evalue=2.3e-30 interpro_id=IPR001395 interpro_description=Aldo/keto reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD20_83_8

Not on your lists

6991..8271
DNA (1281bp) protein (427aa)
homoserine dehydrogenase
homoserine dehydrogenase
Homoserine dehydrogenase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3P6_DESRM (db=UNIREF evalue=5.0e-93 bit_score=345.0 identity=46.06 coverage=95.5503512880562)
seg (db=Seg db_id=seg from=10 to=15)
ACD20_83_9

Not on your lists

8292..9365
DNA (1074bp) protein (358aa)
ThrC2; threonine synthase (EC:4.2.3.1)
ThrC2; threonine synthase (EC:4.2.3.1)
L-threonine synthase n=4 Tax=Nostocaceae RepID=Q3M8G1_ANAVT (db=UNIREF evalue=2.0e-121 bit_score=439.0 identity=62.89 coverage=97.7653631284916)
seg (db=Seg db_id=seg from=89 to=109)
ACD20_83_10

Not on your lists

9400..10701
DNA (1302bp) protein (434aa)
Asparaginyl-tRNA synthetase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCV8_ELUMP (db=UNIREF evalue=7.0e-180 bit_score=633.0 identity=66.67 coverage=97.926267281106)
asparaginyl-tRNA synthetase
asparaginyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=254 to=275 evalue=NA)
ACD20_83_11

Not on your lists

10816..11328
DNA (513bp) protein (171aa)
redox family protein
C_GCAxxG_C_C (db=HMMPfam db_id=PF09719 from=40 to=160 evalue=9.4e-26 interpro_id=IPR010181 interpro_description=CGCAxxGCC motif)
C_GCAxxG_C_C: C_GCAxxG_C_C family protei (db=HMMTigr db_id=TIGR01909 from=40 to=161 evalue=1.0e-23 interpro_id=IPR010181 interpro_description=CGCAxxGCC motif)
Redox family protein {ECO:0000313|EMBL:EKE02740.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_12

Not on your lists

11454..12764
DNA (1311bp) protein (437aa)
hypothetical protein
seg (db=Seg db_id=seg from=377 to=397)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
ACD20_83_13

Not on your lists

12892..14508
DNA (1617bp) protein (539aa)
coiled-coil (db=Coil db_id=coil from=84 to=112 evalue=NA)
coiled-coil (db=Coil db_id=coil from=206 to=227 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE02742.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_14

Not on your lists

comp(14559..15464)
DNA (906bp) protein (302aa)
coiled-coil (db=Coil db_id=coil from=251 to=286 evalue=NA)
seg (db=Seg db_id=seg from=133 to=152)
Uncharacterized protein {ECO:0000313|EMBL:EKE02743.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_15

Not on your lists

comp(15604..16854)
DNA (1251bp) protein (417aa)
Histidinol dehydrogenase n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WVI8_9BACL (db=UNIREF evalue=3.0e-106 bit_score=389.0 identity=49.62 coverage=91.8465227817746)
histidinol dehydrogenase (EC:1.1.1.23)
histidinol dehydrogenase (EC:1.1.1.23)
seg (db=Seg db_id=seg from=18 to=29)
ACD20_83_16

Not on your lists

comp(16967..18193)
DNA (1227bp) protein (409aa)
Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI7_KANKD (db=UNIREF evalue=7.0e-99 bit_score=364.0 identity=46.1 coverage=99.0220048899755)
phosphoribosyl-ATP diphosphatase
phosphoribosyl-ATP diphosphatase
His_biosynth (db=HMMPfam db_id=PF00977 from=1 to=212 evalue=7.7e-44 interpro_id=IPR006062 interpro_description=Histidine biosynthesis GO=Biological Process: histidine biosynthetic process (GO:0000105))
ACD20_83_17

Not on your lists

comp(18212..18970)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Hydrogenobacter thermophilus TK-6 RepID=D3DGC8_HYDTT (db=UNIREF evalue=8.0e-87 bit_score=323.0 identity=61.75 coverage=98.4189723320158)
Imidazole glycerol phosphate synthase cyclase subunit
Imidazole glycerol phosphate synthase cyclase subunit
hisF: imidazoleglycerol phosphate synthase, (db=HMMTigr db_id=TIGR00735 from=1 to=251 evalue=4.8e-149 interpro_id=IPR004651 interpro_description=Histidine biosynthesis, HisF GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate synthase activity (GO:0000107), Cellular Component: cytoplasm (GO:0005737))
ACD20_83_18

Not on your lists

comp(19153..19758)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B062_RUMGN (db=UNIREF evalue=1.0e-44 bit_score=182.0 identity=48.0 coverage=95.049504950495)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase, glutamine amidotransferase HisH subunit (db=HMMPIR db_id=PIRSF000495 from=1 to=198 evalue=1.9e-80 interpro_id=IPR016226 interpro_description=Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit H GO=Biological Process: histidine biosynthetic process (GO:0000105), Cellular Component: cytoplasm (GO:0005737), Molecular Function: transferase activity (GO:0016740))
IMP_synth_hisH: imidazole glycerol pho (db=HMMTigr db_id=TIGR01855 from=3 to=195 evalue=1.2e-67 interpro_id=IPR010139 interpro_description=Imidazole glycerol phosphate synthase, subunit H GO=Biological Process: histidine biosynthetic process (GO:0000105), Cellular Component: cytoplasm (GO:0005737), Molecular Function: transferase activity, transferring pentosyl groups (GO:0016763))
ACD20_83_19

Not on your lists


comp(19789..20373)
DNA (585bp) protein (195aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
IGP_DEHYDRATASE_2 (db=PatternScan db_id=PS00955 from=155 to=167 evalue=0.0 interpro_id=IPR020565 interpro_description=Imidazoleglycerol-phosphate dehydratase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate dehydratase activity (GO:0004424))
IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 (db=HMMPanther db_id=PTHR23133 from=1 to=194 evalue=3.0e-97)
IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 (db=HMMPanther db_id=PTHR23133:SF2 from=1 to=194 evalue=3.0e-97)
ACD20_83_20

Not on your lists

comp(20383..22092)
DNA (1710bp) protein (570aa)
hisC; histidinol-phosphate transaminase (EC:2.6.1.9)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=207 to=220 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=18 to=345 evalue=4.0e-67 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11751:SF3 from=39 to=347 evalue=4.6e-65)
ACD20_83_21

Not on your lists

comp(22101..23420)
DNA (1320bp) protein (440aa)
glycosyl transferase family protein
Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YZP3_9CYAN (db=UNIREF evalue=6.0e-64 bit_score=248.0 identity=36.91 coverage=89.3181818181818)
transmembrane_regions (db=TMHMM db_id=tmhmm from=393 to=415)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
also family 4? Jill Banfield (11/15/12)
ACD20_83_22

Not on your lists

comp(23498..24697)
DNA (1200bp) protein (400aa)
Glycosyltransferase
seg (db=Seg db_id=seg from=3 to=14)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=23 to=394 evalue=6.2e-28)
Glyco_tran_28_C (db=HMMPfam db_id=PF04101 from=268 to=375 evalue=1.3e-19 interpro_id=IPR007235 interpro_description=Glycosyl transferase, family 28, C-terminal GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758), Molecular Function: carbohydrate binding (GO:0030246), Biological Process: lipid glycosylation (GO:0030259))
ACD20_83_23

Not on your lists

comp(24793..26184)
DNA (1392bp) protein (464aa)
major facilitator superfamily transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=434 to=456)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=164 to=186)
ACD20_83_24

Not on your lists

comp(26172..26954)
DNA (783bp) protein (261aa)
DNA repair protein RecO
ArfGap/RecO-like zinc finger (db=superfamily db_id=SSF57863 from=81 to=249 evalue=3.9e-24 interpro_id=IPR001164 interpro_description=Arf GTPase activating protein GO=Molecular Function: ARF GTPase activator activity (GO:0008060), Molecular Function: zinc ion binding (GO:0008270), Biological Process: regulation of ARF GTPase activity (GO:0032312))
reco: DNA repair protein RecO (db=HMMTigr db_id=TIGR00613 from=4 to=259 evalue=4.6e-22 interpro_id=IPR003717 interpro_description=Recombination protein O, RecO GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
RecO_N (db=HMMPfam db_id=PF11967 from=1 to=79 evalue=1.0e-16)
ACD20_83_25

Not on your lists

comp(26972..27127)
DNA (156bp) protein (52aa)
26972..27127 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02754.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_26

Not on your lists

27473..27949
DNA (477bp) protein (159aa)
27473..27949 + (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02755.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_27

Not on your lists

comp(28175..29560)
DNA (1386bp) protein (462aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA homolog n=1 Tax=Bacillus halodurans RepID=RADA_BACHD (db=UNIREF evalue=5.0e-123 bit_score=444.0 identity=53.1 coverage=97.4025974025974)
seg (db=Seg db_id=seg from=81 to=96)
ACD20_83_28

Not on your lists

29885..31084
DNA (1200bp) protein (400aa)
29885..31084 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02757.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_29

Not on your lists

31101..32984
DNA (1884bp) protein (628aa)
seg (db=Seg db_id=seg from=96 to=111)
seg (db=Seg db_id=seg from=585 to=602)
transmembrane_regions (db=TMHMM db_id=tmhmm from=585 to=602)
Uncharacterized protein {ECO:0000313|EMBL:EKE02758.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_83_30

Not on your lists

32968..34863
DNA (1896bp) protein (632aa)
alpha amylase catalytic region
seg (db=Seg db_id=seg from=70 to=85)
no description (db=Gene3D db_id=G3DSA:3.20.20.80 from=100 to=489 evalue=7.4e-41 interpro_id=IPR013781 interpro_description=Glycoside hydrolase, subgroup, catalytic core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=23 to=490 evalue=1.5e-37 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
Displaying items 1-30 of 40 in total

View Taxonomy