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ACD20_89

Alias: ACD20_109490.13163.14

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_89_1

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comp(46..1701)
DNA (1656bp) protein (552aa)
hybrid cluster protein
hybrid cluster protein
Hydroxylamine reductase n=1 Tax=Aminobacterium colombiense DSM 12261 RepID=D5EHI5_AMICL (db=UNIREF evalue=0.0 bit_score=726.0 identity=61.97 coverage=98.731884057971)
coiled-coil (db=Coil db_id=coil from=89 to=110 evalue=NA)
ACD20_89_2

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comp(1849..2277)
DNA (429bp) protein (143aa)
BadM/Rrf2 family transcriptional regulator
HTH_RRF2_1 (db=PatternScan db_id=PS01332 from=52 to=70 evalue=0.0 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
rrf2_super: rrf2 family protein (putative (db=HMMTigr db_id=TIGR00738 from=6 to=136 evalue=9.2e-32 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=140 evalue=9.6e-29)
ACD20_89_3

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comp(2442..3263)
DNA (822bp) protein (274aa)
4Fe-4S ferredoxin
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=D5U5P7_9SPIR (db=UNIREF evalue=3.0e-98 bit_score=361.0 identity=65.45 coverage=98.5401459854015)
seg (db=Seg db_id=seg from=59 to=70)
ACD20_89_4

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comp(3260..3856)
DNA (597bp) protein (199aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGB2_CLOAI (db=UNIREF evalue=1.0e-27 bit_score=126.0 identity=40.21 coverage=94.4723618090452)
seg (db=Seg db_id=seg from=120 to=135)
Tetracyclin repressor-like, C-terminal domain (db=superfamily db_id=SSF48498 from=78 to=195 evalue=1.7e-20 interpro_id=IPR011075 interpro_description=Tetracycline transcriptional regulator, TetR-related, C-terminal GO=Molecular Function: transcription regulator activity (GO:0030528), Biological Process: regulation of transcription (GO:0045449))
ACD20_89_5

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4112..8041
DNA (3930bp) protein (1310aa)
sensory transduction histidine kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=169)
ACD20_89_6

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comp(8298..9092)
DNA (795bp) protein (265aa)
coiled-coil (db=Coil db_id=coil from=58 to=79 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE04718.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_89_7

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comp(9209..9997)
DNA (789bp) protein (263aa)
9209..9997 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04719.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_89_8

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10242..11627
DNA (1386bp) protein (462aa)
RNA methyltransferase, TrmA family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCA6_9FIRM (db=UNIREF evalue=6.0e-91 bit_score=338.0 identity=38.16 coverage=96.969696969697)
TrmA family RNA methyltransferase
TrmA family RNA methyltransferase
TRMA_1 (db=PatternScan db_id=PS01230 from=391 to=422 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
ACD20_89_9

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11727..12206
DNA (480bp) protein (160aa)
acetyltransferase
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=16 to=133 evalue=7.3e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=59 to=133 evalue=3.8e-11 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=29 to=144 evalue=2.4e-07 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD20_89_10

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12203..12700
DNA (498bp) protein (166aa)
rplI; 50S ribosomal protein L9
seg (db=Seg db_id=seg from=150 to=165)
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
ACD20_89_11

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comp(12767..13201)
DNA (435bp) protein (145aa)
seg (db=Seg db_id=seg from=72 to=90)
Uncharacterized protein {ECO:0000313|EMBL:EKE04723.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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