Alias: ACD20_55763.26714.14
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD20_90_1
uncultured bacterium, Bacteria
|
Not on your lists |
377..2182
|
hypothetical protein
hypothetical protein
Radical SAM domain protein n=2 Tax=Dehalococcoides RepID=D3SKI8_DEHSG (db=UNIREF evalue=2.0e-87 bit_score=327.0 identity=32.97 coverage=89.3687707641196)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=307 to=524 evalue=2.7e-19)
|
|
ACD20_90_2
uncultured bacterium, Bacteria
|
Not on your lists |
comp(2225..3916)
|
dihydroxy-acid dehydratase
dihydroxy-acid dehydratase
Dihydroxy-acid dehydratase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=ILVD_PELPD (db=UNIREF evalue=0.0 bit_score=667.0 identity=61.01 coverage=97.5177304964539)
seg (db=Seg db_id=seg from=216 to=229)
|
|
ACD20_90_3
uncultured bacterium, Bacteria
|
Not on your lists |
comp(4080..4202)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=4 to=22)
Uncharacterized protein {ECO:0000313|EMBL:EKE02810.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD20_90_4
uncultured bacterium, Bacteria
|
Not on your lists |
comp(4380..4928)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=38 to=49)
Pili subunits (db=superfamily db_id=SSF54523 from=6 to=100 evalue=4.0e-14)
|
|
ACD20_90_5
uncultured bacterium, Bacteria
|
Not on your lists |
comp(5235..5915)
|
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2LAD6_9DELT (db=UNIREF evalue=4.0e-38 bit_score=161.0 identity=43.89 coverage=92.511013215859)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=155)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=104)
|
|
ACD20_90_6
uncultured bacterium, Bacteria
|
Not on your lists |
comp(5915..6589)
|
glutamine abc transporter glutamine-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176)
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=147)
|
|
ACD20_90_7
uncultured bacterium, Bacteria
|
Not on your lists |
comp(6593..7396)
|
amino acid ABC transporter substrate-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
SBP_BACTERIAL_3 (db=PatternScan db_id=PS01039 from=68 to=81 evalue=0.0 interpro_id=IPR018313 interpro_description=Extracellular solute-binding protein, family 3, conserved site GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: outer membrane-bounded periplasmic space (GO:0030288))
no description (db=HMMSmart db_id=SM00062 from=45 to=266 evalue=7.1e-70 interpro_id=IPR001638 interpro_description=Extracellular solute-binding protein, family 3 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: outer membrane-bounded periplasmic space (GO:0030288))
|
|
ACD20_90_8
uncultured bacterium, Bacteria
|
Not on your lists |
comp(7432..8166)
|
GlnQ; polar amino acid ABC transporter ATPase
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=137 to=151 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=239 evalue=8.4e-137)
GLUTAMATE / GLUTAMINE ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF33 from=2 to=239 evalue=8.4e-137)
|
|
ACD20_90_9
uncultured bacterium, Bacteria
|
Not on your lists |
8448..8885
|
hypothetical protein
seg (db=Seg db_id=seg from=55 to=67)
coiled-coil (db=Coil db_id=coil from=70 to=105 evalue=NA)
coiled-coil (db=Coil db_id=coil from=27 to=48 evalue=NA)
|
|
ACD20_90_10
uncultured bacterium, Bacteria
|
Not on your lists |
8926..9453
|
16S rRNA processing protein rimm
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=4 to=169 evalue=4.2e-46 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022))
Translation proteins (db=superfamily db_id=SSF50447 from=3 to=91 evalue=2.7e-18 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel)
RimM (db=HMMPfam db_id=PF01782 from=7 to=87 evalue=7.2e-18 interpro_id=IPR002676 interpro_description=RimM protein GO=Biological Process: rRNA processing (GO:0006364))
|
|
ACD20_90_11
uncultured bacterium, Bacteria
|
Not on your lists |
9493..10233
|
tRNA (Guanine37-N(1)-) methyltransferase
seg (db=Seg db_id=seg from=118 to=132)
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=234 evalue=3.0e-138 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=241 evalue=2.9e-126 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
|
|
ACD20_90_12
uncultured bacterium, Bacteria
|
Not on your lists |
10236..11084
|
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=260 to=279)
transmembrane_regions (db=TMHMM db_id=tmhmm from=231 to=253)
|
|
ACD20_90_13
uncultured bacterium, Bacteria
|
Not on your lists |
comp(11106..11357)
|
11106..11357 - (rbs_motif=AGGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02820.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD20_90_14
uncultured bacterium, Bacteria
|
Not on your lists |
11621..13162
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=275)
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=323)
|
|
ACD20_90_15
uncultured bacterium, Bacteria
|
Not on your lists |
13189..14742
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=349 to=366)
transmembrane_regions (db=TMHMM db_id=tmhmm from=309 to=328)
transmembrane_regions (db=TMHMM db_id=tmhmm from=285 to=299)
|
|
ACD20_90_16
uncultured bacterium, Bacteria
|
Not on your lists |
14831..16390
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=304 to=326)
transmembrane_regions (db=TMHMM db_id=tmhmm from=284 to=298)
|
|
ACD20_90_17
uncultured bacterium, Bacteria
|
Not on your lists |
16436..17860
|
glcD1; glycolate oxidase subunit GlcD
glcD1; glycolate oxidase subunit GlcD
Glycolate oxidase subunit n=1 Tax=Oceanobacillus iheyensis RepID=Q8EML1_OCEIH (db=UNIREF evalue=4.0e-125 bit_score=452.0 identity=48.17 coverage=97.2631578947368)
seg (db=Seg db_id=seg from=405 to=416)
|
|
ACD20_90_18
uncultured bacterium, Bacteria
|
Not on your lists |
17880..19118
|
hypothetical protein
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=65 to=76 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=14 to=25 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
Glycolate oxidase, iron-sulphur subunit (db=HMMPIR db_id=PIRSF000139 from=1 to=412 evalue=2.0e-74 interpro_id=IPR012257 interpro_description=Glycolate oxidase, iron-sulphur subunit)
|
|
ACD20_90_19
uncultured bacterium, Bacteria
|
Not on your lists |
comp(19126..20061)
|
Flp pilus assembly protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=278 to=300)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=259 to=273)
|
|
ACD20_90_20
uncultured bacterium, Bacteria
|
Not on your lists |
comp(20084..21049)
|
type II secretion system F domain protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=313)
transmembrane_regions (db=TMHMM db_id=tmhmm from=262 to=281)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=134)
|
|
ACD20_90_21
uncultured bacterium, Bacteria
|
Not on your lists |
comp(21064..22608)
|
type II secretion system protein E
type II secretion system protein E
Type II secretion system protein E n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QX05_PIRSD (db=UNIREF evalue=2.0e-132 bit_score=476.0 identity=57.24 coverage=81.9417475728155)
seg (db=Seg db_id=seg from=237 to=252)
|
|
ACD20_90_22
uncultured bacterium, Bacteria
|
Not on your lists |
comp(22622..23851)
|
response regulator receiver protein
Response regulator receiver protein n=1 Tax=Geobacter sp. M18 RepID=C6MUN1_9DELT (db=UNIREF evalue=1.0e-57 bit_score=228.0 identity=33.06 coverage=89.7560975609756)
seg (db=Seg db_id=seg from=25 to=37)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=133 to=382 evalue=7.2e-44)
|
|
ACD20_90_23
uncultured bacterium, Bacteria
|
Not on your lists |
comp(23853..25253)
|
type II and III secretion system protein
seg (db=Seg db_id=seg from=188 to=200)
Secretin (db=HMMPfam db_id=PF00263 from=295 to=458 evalue=1.5e-46 interpro_id=IPR004846 interpro_description=Type II/III secretion system GO=Biological Process: protein secretion (GO:0009306))
BCTERIALGSPD (db=FPrintScan db_id=PR00811 from=422 to=440 evalue=1.6e-12)
|
|
ACD20_90_24
uncultured bacterium, Bacteria
|
Not on your lists |
comp(25274..26209)
|
Flp pilus assembly protein CpaB n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEA3_9FIRM (db=UNIREF evalue=2.0e-08 bit_score=63.5 identity=29.3 coverage=47.7564102564103)
seg (db=Seg db_id=seg from=73 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=255 to=272)
|