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ACD20_94

Alias: ACD20_93193.37104.15

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_94_1

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comp(564..1529)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB41_9ZZZZ (db=UNIREF evalue=5.0e-14 bit_score=82.4 identity=24.16 coverage=89.4409937888199)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE02177.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_2

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comp(1537..3039)
DNA (1503bp) protein (501aa)
putative membrane protein involved in D-alanine export
putative membrane protein involved in D-alanine export
Alginate O-acetylation protein n=1 Tax=Campylobacter showae RM3277 RepID=C6RD74_9PROT (db=UNIREF evalue=7.0e-159 bit_score=564.0 identity=60.0 coverage=96.6067864271457)
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
ACD20_94_3

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3709..5070
DNA (1362bp) protein (454aa)
glycosyl transferase group 1
Glycosyltransferase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YK17_9CYAN (db=UNIREF evalue=5.0e-59 bit_score=232.0 identity=36.45 coverage=88.5462555066079)
seg (db=Seg db_id=seg from=146 to=157)
seg (db=Seg db_id=seg from=106 to=118)
ACD20_94_4

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5089..6255
DNA (1167bp) protein (389aa)
glycosyltransferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=386 evalue=2.4e-54)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=3 to=386 evalue=6.4e-50)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF33 from=3 to=386 evalue=6.4e-50)
ACD20_94_5

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6420..7295
DNA (876bp) protein (292aa)
type 12 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=53 to=239 evalue=2.7e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=53 to=240 evalue=6.6e-21)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=87 to=177 evalue=5.1e-18 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD20_94_6

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7354..8760
DNA (1407bp) protein (469aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=440 to=457)
transmembrane_regions (db=TMHMM db_id=tmhmm from=416 to=433)
transmembrane_regions (db=TMHMM db_id=tmhmm from=374 to=396)
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=275)
ACD20_94_7

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8757..9800
DNA (1044bp) protein (348aa)
group 1 glycosyl transferase
seg (db=Seg db_id=seg from=74 to=83)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=346 evalue=6.8e-63)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=345 evalue=9.5e-54)
ACD20_94_8

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9809..11056
DNA (1248bp) protein (416aa)
glycosyl transferase family protein
Lipopolysaccharide N-acetylglucosaminyltransferase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YZQ0_LISDA (db=UNIREF evalue=2.0e-58 bit_score=230.0 identity=35.02 coverage=94.9519230769231)
coiled-coil (db=Coil db_id=coil from=363 to=384 evalue=NA)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=410 evalue=2.3e-68)
ACD20_94_9

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comp(11043..12092)
DNA (1050bp) protein (350aa)
glycosyl transferase family 2
seg (db=Seg db_id=seg from=317 to=330)
coiled-coil (db=Coil db_id=coil from=211 to=232 evalue=NA)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=3 to=241 evalue=1.1e-64)
ACD20_94_10

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comp(12089..12964)
DNA (876bp) protein (292aa)
glycosyl transferase family protein
seg (db=Seg db_id=seg from=144 to=156)
GALACTOSIDE 2-L-FUCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR11927 from=1 to=291 evalue=1.4e-47 interpro_id=IPR002516 interpro_description=Glycosyl transferase, family 11 GO=Cellular Component: Golgi apparatus (GO:0005794), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: galactoside 2-alpha-L-fucosyltransferase activity (GO:0008107), Cellular Component: membrane (GO:0016020))
Glyco_transf_11 (db=HMMPfam db_id=PF01531 from=3 to=288 evalue=3.0e-38 interpro_id=IPR002516 interpro_description=Glycosyl transferase, family 11 GO=Cellular Component: Golgi apparatus (GO:0005794), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: galactoside 2-alpha-L-fucosyltransferase activity (GO:0008107), Cellular Component: membrane (GO:0016020))
ACD20_94_11

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comp(12969..13805)
DNA (837bp) protein (279aa)
FkbM family methyltransferase
seg (db=Seg db_id=seg from=130 to=138)
fkbM_fam: methyltransferase, FkbM family (db=HMMTigr db_id=TIGR01444 from=63 to=210 evalue=8.3e-25 interpro_id=IPR006342 interpro_description=Methyltransferase FkbM)
FkbM family methyltransferase {ECO:0000313|EMBL:EKE02187.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_12

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comp(13809..14537)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YZY4_METPS (db=UNIREF evalue=1.0e-85 bit_score=319.0 identity=65.22 coverage=93.4156378600823)
hypothetical protein rbh
hypothetical protein rbh
DUF268 (db=HMMPfam db_id=PF03269 from=130 to=189 evalue=3.2e-18 interpro_id=IPR004951 interpro_description=Protein of unknown function DUF268, Caenorhabditis species)
ACD20_94_13

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comp(14549..15640)
DNA (1092bp) protein (364aa)
14549..15640 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE02189.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_14

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comp(15637..16215)
DNA (579bp) protein (193aa)
transferase hexapeptide repeat containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=150)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=15 to=169 evalue=4.9e-18 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=12 to=169 evalue=9.8e-14)
ACD20_94_15

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comp(16230..17162)
DNA (933bp) protein (311aa)
Nucleoside-diphosphate-sugar epimerase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=308 evalue=2.1e-46)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=308 evalue=6.7e-44)
Epimerase (db=HMMPfam db_id=PF01370 from=3 to=236 evalue=1.1e-36 interpro_id=IPR001509 interpro_description=NAD-dependent epimerase/dehydratase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular metabolic process (GO:0044237), Molecular Function: coenzyme binding (GO:0050662))
ACD20_94_16

Not on your lists

comp(17166..18266)
DNA (1101bp) protein (367aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Caulobacter sp. K31 RepID=B0T5A4_CAUSK (db=UNIREF evalue=4.0e-99 bit_score=365.0 identity=51.93 coverage=98.3651226158038)
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase
seg (db=Seg db_id=seg from=113 to=122)
ACD20_94_17

Not on your lists

comp(18289..19221)
DNA (933bp) protein (311aa)
N-glycosyltransferase
Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABV6_9CLOT (db=UNIREF evalue=2.0e-16 bit_score=90.5 identity=28.57 coverage=67.8456591639871)
seg (db=Seg db_id=seg from=260 to=273)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=216 evalue=1.8e-44)
ACD20_94_18

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comp(19261..20139)
DNA (879bp) protein (293aa)
exostosin family protein (db=KEGG evalue=8.0e-08 bit_score=61.2 identity=33.33 coverage=34.8122866894198)
Exostosin (db=HMMPfam db_id=PF03016 from=141 to=244 evalue=4.1e-08 interpro_id=IPR004263 interpro_description=Exostosin-like GO=Cellular Component: membrane (GO:0016020))
EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED (db=HMMPanther db_id=PTHR11062 from=21 to=263 evalue=9.8e-08)
Exostosin (db=HMMPfam db_id=PF03016 from=3 to=88 evalue=1.8e-05 interpro_id=IPR004263 interpro_description=Exostosin-like GO=Cellular Component: membrane (GO:0016020))
Exostosin-1 (EXT1) is a glycosyltransferase required for the biosynthesis of heparan-sulfate. Jill Banfield (11/15/12)
ACD20_94_19

Not on your lists

comp(20140..21156)
DNA (1017bp) protein (339aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=78 to=267 evalue=3.6e-20)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=98 to=266 evalue=2.1e-09)
Methyltransf_12 (db=HMMPfam db_id=PF08242 from=122 to=216 evalue=1.5e-08 interpro_id=IPR013217 interpro_description=Methyltransferase type 12)
ACD20_94_20

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comp(21414..21935)
DNA (522bp) protein (174aa)
hypothetical protein
hypothetical protein alias=ACD20_C00094G00020,ACD20_93193.37104.15G0020,ACD20_93193.37104.15_20 id=19911 tax=ACD20 species=Flavobacteria bacterium BBFL7 genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02196.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_21

Not on your lists

comp(21928..23193)
DNA (1266bp) protein (422aa)
ABC transporter related protein n=1 Tax='Nostoc azollae' 0708 RepID=B9YG56_ANAAZ (db=UNIREF evalue=7.0e-108 bit_score=394.0 identity=76.19 coverage=58.2938388625592)
polysaccharide/polyol phosphate ABC transporter ATPase
polysaccharide/polyol phosphate ABC transporter ATPase
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=294 evalue=5.4e-96)
ACD20_94_22

Not on your lists

comp(23203..24045)
DNA (843bp) protein (281aa)
ABC transporter
ABC transporter
ABC-2 type transporter n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KM11_CYAP7 (db=UNIREF evalue=3.0e-104 bit_score=381.0 identity=69.89 coverage=95.3736654804271)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
ACD20_94_23

Not on your lists

24217..25647
DNA (1431bp) protein (477aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=41)
seg (db=Seg db_id=seg from=73 to=86)
seg (db=Seg db_id=seg from=214 to=233)
ACD20_94_24
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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25723..26892
DNA (1170bp) protein (390aa)
Fe-S oxidoreductase
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=30 to=363 evalue=5.4e-45 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=129 to=382 evalue=2.1e-27)
no description (db=HMMSmart db_id=SM00729 from=166 to=373 evalue=1.1e-16 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB)
ACD20_94_25

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27158..27769
DNA (612bp) protein (204aa)
plasmid pRiA4b ORF-3 family protein
seg (db=Seg db_id=seg from=184 to=198)
PRiA4_ORF3 (db=HMMPfam db_id=PF07929 from=3 to=192 evalue=5.7e-65 interpro_id=IPR012912 interpro_description=Plasmid pRiA4b ORF-3-like)
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:EKE02169.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_26

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27880..28137
DNA (258bp) protein (86aa)
CopG family transcriptional regulator
seg (db=Seg db_id=seg from=69 to=80)
CopG family transcriptional regulator alias=ACD20_C00094G00026,ACD20_93193.37104.15G0026,ACD20_93193.37104.15_26 id=19896 tax=ACD20 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
CopG family transcriptional regulator {ECO:0000313|EMBL:EKE02170.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_27

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28127..28420
DNA (294bp) protein (98aa)
addiction module toxin RelE/StbE
Plasmid_stabil (db=HMMPfam db_id=PF05016 from=6 to=93 evalue=1.4e-15 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
RelE_StbE: addiction module toxin, RelE/Stb (db=HMMTigr db_id=TIGR02385 from=4 to=93 evalue=1.2e-07 interpro_id=IPR012753 interpro_description=Addiction module toxin, RelE/StbE)
addiction module toxin, RelE/StbE alias=ACD20_C00094G00027,ACD20_93193.37104.15G0027,ACD20_93193.37104.15_27 id=19901 tax=ACD20 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_94_28

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28595..28861
DNA (267bp) protein (89aa)
seg (db=Seg db_id=seg from=65 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKE02172.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_94_29

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comp(29724..31790)
DNA (2067bp) protein (689aa)
Fibronectin type III domain protein
seg (db=Seg db_id=seg from=585 to=595)
seg (db=Seg db_id=seg from=469 to=487)
Fibronectin type III (db=superfamily db_id=SSF49265 from=468 to=601 evalue=4.5e-08 interpro_id=IPR008957 interpro_description=Fibronectin, type III-like fold)
ACD20_94_30

Not on your lists

32128..33264
DNA (1137bp) protein (379aa)
putative S-layer protein
S-layer domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VYP3_9CYAN (db=UNIREF evalue=7.0e-30 bit_score=135.0 identity=31.49 coverage=72.8232189973615)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
SLH (db=HMMPfam db_id=PF00395 from=27 to=69 evalue=6.4e-18 interpro_id=IPR001119 interpro_description=S-layer homology domain)
Displaying items 1-30 of 32 in total

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