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ACD20_106

Alias: ACD20_50631.62921.14

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Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_106_31

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comp(28655..29062)
DNA (408bp) protein (136aa)
translation initiation factor IF-3
seg (db=Seg db_id=seg from=28 to=53)
IF3 (db=PatternScan db_id=PS00938 from=22 to=35 evalue=0.0 interpro_id=IPR019813 interpro_description=Translation initiation factor 3, conserved site GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
TRANSLATION INITIATION FACTOR IF-3 (db=HMMPanther db_id=PTHR10938 from=1 to=132 evalue=1.6e-36 interpro_id=IPR001288 interpro_description=Translation initiation factor 3 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
ACD20_106_32

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comp(29581..31671)
DNA (2091bp) protein (697aa)
elongation factor G
elongation factor G
Translation elongation factor G n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXI2_DESAC (db=UNIREF evalue=0.0 bit_score=749.0 identity=55.25 coverage=97.9913916786227)
seg (db=Seg db_id=seg from=688 to=696)
ACD20_106_33

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comp(31891..33156)
DNA (1266bp) protein (422aa)
molybdenum cofactor synthesis domain-containing protein
seg (db=Seg db_id=seg from=172 to=183)
MOLYBDOPTERIN BIOSYNTHESIS PROTEIN (db=HMMPanther db_id=PTHR10192 from=14 to=421 evalue=7.4e-94)
no description (db=Gene3D db_id=G3DSA:3.40.980.10 from=161 to=350 evalue=4.2e-47 interpro_id=IPR001453 interpro_description=Molybdopterin binding GO=Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777))
ACD20_106_34

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33361..34026
DNA (666bp) protein (222aa)
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase n=1 Tax=Streptococcus salivarius SK126 RepID=C2LSY5_STRSL (db=UNIREF evalue=5.0e-60 bit_score=234.0 identity=58.69 coverage=94.1441441441441)
Deoxyribose-phosphate aldolase (db=HMMPIR db_id=PIRSF001357 from=4 to=221 evalue=1.9e-77 interpro_id=IPR011343 interpro_description=Deoxyribose-phosphate aldolase GO=Molecular Function: deoxyribose-phosphate aldolase activity (GO:0004139), Cellular Component: cytoplasm (GO:0005737), Biological Process: deoxyribonucleotide catabolic process (GO:0009264))
DEOXYRIBOSE-PHOSPHATE ALDOLASE (db=HMMPanther db_id=PTHR10889 from=7 to=219 evalue=1.5e-72 interpro_id=IPR011343 interpro_description=Deoxyribose-phosphate aldolase GO=Molecular Function: deoxyribose-phosphate aldolase activity (GO:0004139), Cellular Component: cytoplasm (GO:0005737), Biological Process: deoxyribonucleotide catabolic process (GO:0009264))
ACD20_106_35

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34097..35125
DNA (1029bp) protein (343aa)
PHP domain-containing protein
PHP domain protein n=3 Tax=Chloroflexus RepID=A9WBD0_CHLAA (db=UNIREF evalue=6.0e-63 bit_score=244.0 identity=39.02 coverage=97.9591836734694)
PHP domain-like (db=superfamily db_id=SSF89550 from=5 to=220 evalue=3.3e-26 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=HMMSmart db_id=SM00481 from=7 to=69 evalue=2.8e-13 interpro_id=IPR003141 interpro_description=Polymerase/histidinol phosphatase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260))
ACD20_106_36

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35154..35570
DNA (417bp) protein (139aa)
hypothetical protein
Uncharacterised conserved protein, UCP004681 type (db=HMMPIR db_id=PIRSF004681 from=1 to=138 evalue=1.2e-40 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=136 evalue=9.2e-38 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
UPF0047 (db=HMMPfam db_id=PF01894 from=19 to=136 evalue=1.2e-34 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
ACD20_106_37

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35729..35926
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=37 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE02964.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_106_38

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comp(36003..38426)
DNA (2424bp) protein (808aa)
ATP-dependent DNA helicase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XQ62_SYNP2 (db=UNIREF evalue=0.0 bit_score=719.0 identity=45.53 coverage=98.1435643564356)
recG; ATP-dependent DNA helicase RecG
recG; ATP-dependent DNA helicase RecG
recG: ATP-dependent DNA helicase RecG (db=HMMTigr db_id=TIGR00643 from=131 to=774 evalue=0.0 interpro_id=IPR004609 interpro_description=DNA helicase, ATP-dependent, RecG GO=Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD20_106_39

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comp(38533..39540)
DNA (1008bp) protein (336aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=221)
ACD20_106_40

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comp(39540..40523)
DNA (984bp) protein (328aa)
glycosyl transferase family 2
glycosyl transferase family 2
Glycosyl transferase family 2 n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0Y7_9CHRO (db=UNIREF evalue=2.0e-103 bit_score=379.0 identity=60.06 coverage=93.5975609756098)
transmembrane_regions (db=TMHMM db_id=tmhmm from=282 to=304)
ACD20_106_41

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comp(40537..42219)
DNA (1683bp) protein (561aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=230)
transmembrane_regions (db=TMHMM db_id=tmhmm from=262 to=284)
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=336)
ACD20_106_42

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comp(42319..44082)
DNA (1764bp) protein (588aa)
fibronectin-binding A domain-containing protein
fibronectin-binding A domain-containing protein
Fibronectin-binding A domain protein n=1 Tax=Thermincola sp. JR RepID=D5X7U4_9FIRM (db=UNIREF evalue=8.0e-89 bit_score=332.0 identity=34.83 coverage=98.6394557823129)
seg (db=Seg db_id=seg from=523 to=534)
ACD20_106_43

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comp(44089..44961)
DNA (873bp) protein (291aa)
Prephenate dehydratase (EC:4.2.1.51)
PREPHENATE_DEHYDR_1 (db=PatternScan db_id=PS00857 from=164 to=186 evalue=0.0 interpro_id=IPR018528 interpro_description=Prephenate dehydratase, conserved site GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
PREPHENATE DEHYDRATASE (P PROTEIN) (db=HMMPanther db_id=PTHR21022 from=1 to=286 evalue=1.5e-80)
PDT (db=HMMPfam db_id=PF00800 from=7 to=187 evalue=5.1e-54 interpro_id=IPR001086 interpro_description=Prephenate dehydratase GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
ACD20_106_44

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45211..46635
DNA (1425bp) protein (475aa)
phosphomannomutase
phosphomannomutase
Phosphoglucomutase/phosphomannomutase n=6 Tax=Nostocaceae RepID=Q3MCC7_ANAVT (db=UNIREF evalue=3.0e-151 bit_score=538.0 identity=54.68 coverage=97.6842105263158)
PGM_PMM (db=PatternScan db_id=PS00710 from=98 to=107 evalue=0.0 interpro_id=IPR016066 interpro_description=Alpha-D-phosphohexomutase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287))
ACD20_106_45

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comp(46715..47494)
DNA (780bp) protein (260aa)
5'-nucleotidase surE n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YMU9_9CYAN (db=UNIREF evalue=1.0e-71 bit_score=273.0 identity=50.57 coverage=95.7692307692308)
3'-nucleotidase (EC:3.1.3.5 3.1.3.6 3.6.1.11)
surE: 5'/3'-nucleotidase SurE (db=HMMTigr db_id=TIGR00087 from=1 to=241 evalue=2.4e-97 interpro_id=IPR002828 interpro_description=Survival protein SurE-like phosphatase/nucleotidase GO=Molecular Function: hydrolase activity (GO:0016787))
SurE-like (db=superfamily db_id=SSF64167 from=1 to=255 evalue=1.2e-80 interpro_id=IPR002828 interpro_description=Survival protein SurE-like phosphatase/nucleotidase GO=Molecular Function: hydrolase activity (GO:0016787))
ACD20_106_46

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comp(47859..49046)
DNA (1188bp) protein (396aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase n=3 Tax=Clostridium thermocellum RepID=BIOF_CLOTH (db=UNIREF evalue=5.0e-82 bit_score=308.0 identity=45.85 coverage=94.9494949494949)
seg (db=Seg db_id=seg from=110 to=125)
ACD20_106_47

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comp(49094..50143)
DNA (1050bp) protein (350aa)
lipopolysaccharide heptosyltransferase II
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=345 evalue=1.1e-87)
Glyco_transf_9 (db=HMMPfam db_id=PF01075 from=80 to=317 evalue=5.7e-42 interpro_id=IPR002201 interpro_description=Glycosyl transferase, family 9 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:3.40.50.2000 from=162 to=343 evalue=2.0e-39)
ACD20_106_48

Not on your lists

comp(50118..51233)
DNA (1116bp) protein (372aa)
tetraacyldisaccharide 4'-kinase (LpxK)
seg (db=Seg db_id=seg from=61 to=74)
LpxK (db=HMMPfam db_id=PF02606 from=23 to=358 evalue=3.5e-88 interpro_id=IPR003758 interpro_description=Tetraacyldisaccharide 4'-kinase GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: tetraacyldisaccharide 4'-kinase activity (GO:0009029), Biological Process: lipid A biosynthetic process (GO:0009245))
lpxK: tetraacyldisaccharide 4'-kinase (db=HMMTigr db_id=TIGR00682 from=28 to=367 evalue=3.0e-54 interpro_id=IPR003758 interpro_description=Tetraacyldisaccharide 4'-kinase GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: tetraacyldisaccharide 4'-kinase activity (GO:0009029), Biological Process: lipid A biosynthetic process (GO:0009245))
ACD20_106_49

Not on your lists

comp(51244..52605)
DNA (1362bp) protein (454aa)
seg (db=Seg db_id=seg from=276 to=294)
seg (db=Seg db_id=seg from=97 to=106)
seg (db=Seg db_id=seg from=9 to=24)
seg (db=Seg db_id=seg from=445 to=453)
ACD20_106_50

Not on your lists

comp(52660..53382)
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=128 to=142 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=3 to=236 evalue=9.2e-102)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF52 from=3 to=236 evalue=9.2e-102)
ACD20_106_51

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comp(53391..54200)
DNA (810bp) protein (270aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=228)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
seg (db=Seg db_id=seg from=249 to=259)
ACD20_106_52

Not on your lists

comp(54285..55160)
DNA (876bp) protein (292aa)
ubiA; 4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
seg (db=Seg db_id=seg from=141 to=163)
ACD20_106_53

Not on your lists

comp(55292..55747)
DNA (456bp) protein (152aa)
hspA2; heat shock protein Hsp20
seg (db=Seg db_id=seg from=83 to=95)
seg (db=Seg db_id=seg from=65 to=80)
seg (db=Seg db_id=seg from=132 to=147)
ACD20_106_54

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56057..56602
DNA (546bp) protein (182aa)
seg (db=Seg db_id=seg from=156 to=171)
seg (db=Seg db_id=seg from=18 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
TadE (db=HMMPfam db_id=PF07811 from=13 to=47 evalue=1.6e-09 interpro_id=IPR012495 interpro_description=TadE-like)
ACD20_106_55

Not on your lists

56620..57873
DNA (1254bp) protein (418aa)
seg (db=Seg db_id=seg from=299 to=309)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE02949.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_106_56

Not on your lists

comp(57897..58289)
DNA (393bp) protein (131aa)
cytidine deaminase
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=56 to=97 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
CYTIDINE DEAMINASE (db=HMMPanther db_id=PTHR11644 from=12 to=128 evalue=1.2e-44)
CYTIDINE DEAMINASE (db=HMMPanther db_id=PTHR11644:SF2 from=12 to=128 evalue=1.2e-44 interpro_id=IPR006262 interpro_description=Cytidine deaminase, homotetrameric GO=Molecular Function: cytidine deaminase activity (GO:0004126), Biological Process: cytidine metabolic process (GO:0046087))
ACD20_106_57

Not on your lists

comp(58304..59947)
DNA (1644bp) protein (548aa)
CTP synthase n=10 Tax=Thermoanaerobacteraceae RepID=PYRG_THETN (db=UNIREF evalue=0.0 bit_score=707.0 identity=64.58 coverage=95.985401459854)
CTP synthase (EC:6.3.4.2)
CTP synthase (EC:6.3.4.2)
PyrG: CTP synthase (db=HMMTigr db_id=TIGR00337 from=1 to=528 evalue=0.0 interpro_id=IPR004468 interpro_description=CTP synthase GO=Molecular Function: CTP synthase activity (GO:0003883), Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221))
ACD20_106_58

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comp(59997..60284)
DNA (288bp) protein (96aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C
gatC: glutamyl-tRNA(Gln) and/or aspartyl-tRN (db=HMMTigr db_id=TIGR00135 from=2 to=94 evalue=2.4e-39 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=1 to=92 evalue=1.8e-36)
Glu-tRNAGln (db=HMMPfam db_id=PF02686 from=18 to=89 evalue=1.6e-28 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
ACD20_106_59

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comp(60443..61639)
DNA (1197bp) protein (399aa)
metal dependent phosphohydrolase
seg (db=Seg db_id=seg from=351 to=362)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=112 to=392 evalue=2.2e-65)
no description (db=Gene3D db_id=G3DSA:1.10.3150.10 from=128 to=392 evalue=2.5e-61)
ACD20_106_60

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comp(61770..62738)
DNA (969bp) protein (323aa)
TPR repeat-containing protein
TPR Domain containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB39A (db=UNIREF evalue=7.0e-20 bit_score=101.0 identity=32.73 coverage=64.7058823529412)
coiled-coil (db=Coil db_id=coil from=240 to=261 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Displaying items 31-60 of 60 in total

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