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ACD20_130

Alias: ACD20_26563.5896.13

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_130_1

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2..304
DNA (303bp) protein (101aa)
Transposase_11 (db=HMMPfam db_id=PF01609 from=14 to=73 evalue=9.3e-14 interpro_id=IPR002559 interpro_description=Transposase, IS4-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=15 to=80 evalue=1.1e-13 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
Uncharacterized protein {ECO:0000313|EMBL:EKE03710.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_130_2

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comp(307..1788)
DNA (1482bp) protein (494aa)
flagellar biosynthesis protein FlhA
coiled-coil (db=Coil db_id=coil from=396 to=417 evalue=NA)
coiled-coil (db=Coil db_id=coil from=121 to=142 evalue=NA)
seg (db=Seg db_id=seg from=61 to=72)
ACD20_130_3

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comp(1942..2778)
DNA (837bp) protein (279aa)
lactose ABC transporter permease
seg (db=Seg db_id=seg from=7 to=24)
seg (db=Seg db_id=seg from=81 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=263)
ACD20_130_4

Not on your lists

comp(2801..3679)
DNA (879bp) protein (293aa)
lactose ABC transporter permease
seg (db=Seg db_id=seg from=21 to=37)
seg (db=Seg db_id=seg from=75 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=258 to=280)
ACD20_130_5

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3911..4453
DNA (543bp) protein (181aa)
3911..4453 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE03714.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_130_6

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4514..4870
DNA (357bp) protein (119aa)
4514..4870 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE03715.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_130_7

Not on your lists

5257..5934
DNA (678bp) protein (226aa)
hag; Flagellar filament 33 kDa core protein Class B
Flagellin homolog n=1 Tax=Sphingomonas sp. A1 RepID=Q2PHB2_9SPHN (db=UNIREF evalue=1.0e-37 bit_score=159.0 identity=55.92 coverage=66.8141592920354)
seg (db=Seg db_id=seg from=201 to=220)
Phase 1 flagellin (db=superfamily db_id=SSF64518 from=1 to=226 evalue=2.3e-50)
Displaying 7 items

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