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ACD20_131

Alias: ACD20_523145.4839.5

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_131_1

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comp(2..469)
DNA (468bp) protein (156aa)
trmE; tRNA modification GTPase TrmE
seg (db=Seg db_id=seg from=140 to=153)
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=48 to=155 evalue=6.7e-43)
TRNA MODIFICATION GTPASE TRME (db=HMMPanther db_id=PTHR11649:SF15 from=48 to=155 evalue=6.7e-43)
ACD20_131_2

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comp(2197..2784)
DNA (588bp) protein (196aa)
ruvA; holliday junction ATP-dependent DNA helicase ruvA (EC:3.6.4.12)
ruvA: Holliday junction DNA helicase RuvA (db=HMMTigr db_id=TIGR00084 from=1 to=193 evalue=3.2e-34 interpro_id=IPR000085 interpro_description=Bacterial DNA recombination protein RuvA GO=Molecular Function: DNA helicase activity (GO:0003678), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=64 to=141 evalue=5.1e-22 interpro_id=IPR010994 interpro_description=RuvA domain 2-like)
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=67 to=157 evalue=8.4e-21)
ACD20_131_3

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comp(2777..3031)
DNA (255bp) protein (85aa)
ruvC; Holliday junction endonuclease RuvC
seg (db=Seg db_id=seg from=53 to=66)
RUVC (db=PatternScan db_id=PS01321 from=31 to=66 evalue=0.0 interpro_id=IPR020563 interpro_description=Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site)
RuvC (db=HMMPfam db_id=PF02075 from=1 to=69 evalue=3.1e-25 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD20_131_4

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3717..4160
DNA (444bp) protein (148aa)
retron-type reverse transcriptase
hypothetical protein CLOSPO_02838 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI0001794BA9 (db=UNIREF evalue=2.0e-10 bit_score=68.2 identity=41.76 coverage=60.1351351351351)
Uncharacterized protein {ECO:0000313|EMBL:EKE02919.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_131_5

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4240..4566
DNA (327bp) protein (109aa)
hypothetical protein
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=7 to=70 evalue=1.1e-06 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Uncharacterized protein {ECO:0000313|EMBL:EKE02920.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD20_523145.4839.5G0005,ACD20_523145.4839.5_5,ACD20_C00131G00005 id=20345 tax=ACD20 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ACD20_131_6

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4567..4872
DNA (306bp) protein (102aa)
HipA-like protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N200_9GAMM (db=UNIREF evalue=2.0e-24 bit_score=114.0 identity=55.0 coverage=97.0588235294118)
HipA-like protein
HipA-like protein {ECO:0000313|EMBL:EKE02921.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

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