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ACD20_165

Alias: ACD20_7535.3067.27

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_165_1

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140..286
DNA (147bp) protein (49aa)
seg (db=Seg db_id=seg from=2 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=33)
Uncharacterized protein {ECO:0000313|EMBL:EKE02445.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_165_2

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324..626
DNA (303bp) protein (101aa)
transcriptional regulator
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=66 evalue=3.3e-14 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=68 evalue=7.4e-14)
no description (db=HMMSmart db_id=SM00530 from=5 to=60 evalue=7.1e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD20_165_3

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613..1506
DNA (894bp) protein (298aa)
retron-type reverse transcriptase
UPI0001D31BE0 related cluster n=1 Tax=unknown RepID=UPI0001D31BE0 (db=UNIREF evalue=3.0e-69 bit_score=265.0 identity=47.04 coverage=94.6308724832215)
RVT_1 (db=HMMPfam db_id=PF00078 from=60 to=245 evalue=6.8e-08 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
Uncharacterized protein {ECO:0000313|EMBL:EKE02447.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_165_4

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1615..2181
DNA (567bp) protein (189aa)
Predicted protein n=1 Tax=Acinetobacter sp. SH024 RepID=D6JQU0_ACIG3 (db=UNIREF evalue=1.0e-18 bit_score=95.9 identity=38.24 coverage=71.4285714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=154 to=176)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
ACD20_165_5
Acinetobacter sp. ANC 3929, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2644..2835)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0T073_ACILW (db=UNIREF evalue=4.0e-27 bit_score=123.0 identity=98.41 coverage=96.875)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
ACD20_165_6
Acinetobacter sp. CIP 101934, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2865..3113)
DNA (249bp) protein (83aa)
Predicted protein n=7 Tax=Acinetobacter RepID=D0T074_ACILW (db=UNIREF evalue=4.0e-21 bit_score=103.0 identity=100.0 coverage=59.0361445783133)
coiled-coil (db=Coil db_id=coil from=7 to=28 evalue=NA)
seg (db=Seg db_id=seg from=1 to=32)
Q40R21_DESAC_Q40R21; (db=BlastProDom db_id=PD029395 from=33 to=81 evalue=5.0e-07)
Displaying 6 items

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