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ACD20_168

Alias: ACD20_19687.3995.19

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_168_1

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comp(2..448)
DNA (447bp) protein (149aa)
reverse transcriptase/maturase family protein
RVT_1 (db=HMMPfam db_id=PF00078 from=4 to=73 evalue=1.7e-14 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=1 to=76 evalue=1.8e-08)
RT_POL (db=ProfileScan db_id=PS50878 from=1 to=73 evalue=13.242 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
ACD20_168_2

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comp(676..1689)
DNA (1014bp) protein (338aa)
Tyrosine recombinase XerD
Tyrosine recombinase XerD
Phage-specific recombinase/integrase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHZ4_DESAH (db=UNIREF evalue=4.0e-147 bit_score=524.0 identity=72.11 coverage=99.4082840236686)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=119 to=313 evalue=1.7e-43 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
ACD20_168_3

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comp(1676..2662)
DNA (987bp) protein (329aa)
putative integrase/recombinase
putative integrase/recombinase
Predicted phage-specific integrase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHZ3_DESAH (db=UNIREF evalue=2.0e-139 bit_score=498.0 identity=69.11 coverage=99.0881458966565)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=110 to=306 evalue=2.1e-32 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
ACD20_168_4

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comp(2655..3890)
DNA (1236bp) protein (412aa)
xerC; protein XerC
xerC; protein XerC
XerC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHZ2_DESAH (db=UNIREF evalue=0.0 bit_score=643.0 identity=77.06 coverage=93.9320388349515)
seg (db=Seg db_id=seg from=2 to=20)
Displaying 4 items

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