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ACD20_171

Alias: ACD20_39815.2264.6

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_171_1

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158..997
DNA (840bp) protein (280aa)
cell elongation-specific peptidoglycan biosynthesis regulator RodA
seg (db=Seg db_id=seg from=241 to=256)
seg (db=Seg db_id=seg from=79 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=204)
ACD20_171_2

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1074..1316
DNA (243bp) protein (81aa)
cell elongation-specific peptidoglycan biosynthesis regulator RodA
seg (db=Seg db_id=seg from=47 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
ACD20_171_3

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1497..2030
DNA (534bp) protein (178aa)
cold-shock'-like DNA-binding protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=111 to=177 evalue=3.0e-13 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=1 to=103 evalue=5.4e-11 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
CSD (db=HMMPfam db_id=PF00313 from=113 to=174 evalue=1.9e-10 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD20_171_4

Not on your lists

2133..2297
DNA (165bp) protein (55aa)
DNA polymerase I (EC:2.7.7.7)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
5_3_exonuc_N (db=HMMPfam db_id=PF02739 from=4 to=54 evalue=1.7e-14 interpro_id=IPR020046 interpro_description=5'-3' exonuclease, N-terminal resolvase-like domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: 5'-3' exonuclease activity (GO:0008409))
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=55 evalue=1.7e-11)
Displaying 4 items

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