ggKbase home page

ACD20_189

Alias: ACD20p_37152.11784.15

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_189_1

Not on your lists

comp(247..438)
DNA (192bp) protein (64aa)
247..438 - ( gc_cont=0.229)
Uncharacterized protein {ECO:0000313|EMBL:EKE02012.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_2

Not on your lists

572..754
DNA (183bp) protein (61aa)
seg (db=Seg db_id=seg from=35 to=47)
Uncharacterized protein {ECO:0000313|EMBL:EKE02013.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_3

Not on your lists

878..1015
DNA (138bp) protein (46aa)
878..1015 + ( gc_cont=0.312)
Uncharacterized protein {ECO:0000313|EMBL:EKE02014.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_4

Not on your lists

comp(1069..2103)
DNA (1035bp) protein (345aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Thermincola potens JR RepID=D5X7B7_THEPJ (db=UNIREF evalue=2.0e-98 bit_score=362.0 identity=51.18 coverage=94.2028985507246)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=14 to=23 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD20_189_5

Not on your lists

2281..2757
DNA (477bp) protein (159aa)
seg (db=Seg db_id=seg from=84 to=109)
seg (db=Seg db_id=seg from=21 to=31)
Uncharacterized protein {ECO:0000313|EMBL:EKE02016.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_6

Not on your lists

comp(2800..3456)
DNA (657bp) protein (219aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
seg (db=Seg db_id=seg from=94 to=115)
Uncharacterized protein {ECO:0000313|EMBL:EKE02017.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_7

Not on your lists

3622..3987
DNA (366bp) protein (122aa)
3622..3987 + ( gc_cont=0.281)
Uncharacterized protein {ECO:0000313|EMBL:EKE02018.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_8

Not on your lists

4047..4670
DNA (624bp) protein (208aa)
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
seg (db=Seg db_id=seg from=148 to=161)
CheY-like (db=superfamily db_id=SSF52172 from=83 to=191 evalue=3.9e-16 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF00072 from=88 to=193 evalue=2.5e-12 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD20_189_9

Not on your lists

4820..5032
DNA (213bp) protein (71aa)
4820..5032 + ( gc_cont=0.296)
Uncharacterized protein {ECO:0000313|EMBL:EKE02020.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_10

Not on your lists

5215..5979
DNA (765bp) protein (255aa)
seg (db=Seg db_id=seg from=80 to=94)
seg (db=Seg db_id=seg from=154 to=162)
coiled-coil (db=Coil db_id=coil from=207 to=242 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE02021.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_11

Not on your lists

comp(6039..7016)
DNA (978bp) protein (326aa)
L-asparaginase, thermolabile (EC:3.5.1.1)
(db=HMMPfam db_id=PF06089 from=7 to=323 evalue=2.0e-89 interpro_id=IPR010349 interpro_description=L-asparaginase II)
putative asparaginase alias=ACD20_C00189G00011,ACD20p_37152.11784.15_11,ACD20p_37152.11784.15G0011 id=20680 tax=ACD20 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02022.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_12

Not on your lists

7245..8024
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=141 to=154)
coiled-coil (db=Coil db_id=coil from=170 to=191 evalue=NA)
coiled-coil (db=Coil db_id=coil from=79 to=100 evalue=NA)
coiled-coil (db=Coil db_id=coil from=55 to=76 evalue=NA)
ACD20_189_13

Not on your lists

8143..8553
DNA (411bp) protein (137aa)
coiled-coil (db=Coil db_id=coil from=24 to=48 evalue=NA)
seg (db=Seg db_id=seg from=20 to=35)
seg (db=Seg db_id=seg from=80 to=90)
Uncharacterized protein {ECO:0000313|EMBL:EKE02024.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_14

Not on your lists

8933..9361
DNA (429bp) protein (143aa)
flagellar protein FliS
Flagellar protein FliS n=1 Tax=Thermincola potens JR RepID=D5XCT5_THEPJ (db=UNIREF evalue=2.0e-25 bit_score=117.0 identity=54.24 coverage=80.4195804195804)
seg (db=Seg db_id=seg from=130 to=136)
coiled-coil (db=Coil db_id=coil from=112 to=133 evalue=NA)
ACD20_189_15

Not on your lists

9428..9796
DNA (369bp) protein (123aa)
coiled-coil (db=Coil db_id=coil from=58 to=101 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE02026.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_189_16

Not on your lists

9920..11239
DNA (1320bp) protein (440aa)
seg (db=Seg db_id=seg from=382 to=398)
seg (db=Seg db_id=seg from=298 to=309)
seg (db=Seg db_id=seg from=348 to=367)
seg (db=Seg db_id=seg from=136 to=152)
ACD20_189_17

Not on your lists

comp(11647..11820)
DNA (174bp) protein (58aa)
11647..11820 - ( gc_cont=0.540)
Uncharacterized protein {ECO:0000313|EMBL:EKE02011.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 17 items

View Taxonomy