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ACD20_53_5

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 3092..3751

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=193 to=204) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=9 to=213 evalue=1.0e-21 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-21
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=125 to=215 evalue=2.6e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.60e-15

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 660
ATGCAATCATCAGAATCTTTAAATAAGTCAACAGAGAAAACAGTTAATGACTACATAGAATTAATTGAGACCATTGCCCGAATAGAATATACAAGGTTAAAAACATCTGCACACTTAATTGATTATTCGGAATTGGTTAATATTGGTGCTATTGCTGTATATATTATACTGACTAATTCTAAATACAGTGACTTTAATATTTCTTATATGTCAACGGCTATAAAGTGGGCTATTAGAAACGAGCTTAGACGTAGATACAAATGGTATGCCTTTAAGCATCAATCTCATAAAGAAGATTCAAAAGATATAGTTGACGGGAATACTGAAGGAATAGATCAATGTCAAATTAGAGAAGCTATTTATGGGGCTATTCTTTCAATAGATGATCTTGCAGATGCAGAAAATCCTGTGCAGATAAAAGATTCTTCTTTAACTCCTGAAGAAAATCTTGAATTCGGAGAATTAAATAAAGCTATCAAAAATGCTATAAAATACTTACCTCCAAGAGAGCGAATGGTTTTGGAGACAAGATTTTTTAAGGATAAAAAGATAAAAGAAATAGCAGAAGACCTGAAAATTTCCTCTTCCAGAGTTTCAAGAATTATTCAATCAGGCCTTGATAAGATAAAAGAGAATCTCAAAAAGCAGGAATTACTCTAG
PROTEIN sequence
Length: 220
MQSSESLNKSTEKTVNDYIELIETIARIEYTRLKTSAHLIDYSELVNIGAIAVYIILTNSKYSDFNISYMSTAIKWAIRNELRRRYKWYAFKHQSHKEDSKDIVDGNTEGIDQCQIREAIYGAILSIDDLADAENPVQIKDSSLTPEENLEFGELNKAIKNAIKYLPPRERMVLETRFFKDKKIKEIAEDLKISSSRVSRIIQSGLDKIKENLKKQELL*