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ACD20_120_7

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(5221..5784)

Top 3 Functional Annotations

Value Algorithm Source
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=2 to=186 evalue=8.5e-19 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.50e-19
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=20 to=69 evalue=9.5e-08 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.50e-08
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=93 to=186 evalue=9.4e-07 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.40e-07

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 564
GTGGAGCTAACAGAAAAACACCGTAATTTAATAGAAAATATTGTAAAAAACAACCCCAGATTCATCGGAAATGAGGATCTGGCAGATGATTTTTGCAGTGAAACCTTTAAAAGAGCCTACAGCATTATTTCATCCTTTGAAAATATAAATAATTTTGAAATATATCTAAATAAGATTGCCAGCTCTGCCATTCTTGACGTGTTAAAAAGTTCAGGAAGACTTAGAAAATCAAAAACCGGATATCATAAAATTCAAGAAAAACTTGTTTCATCTACTTCAACTTATGAGATGGATGAAAATGACAATATTGTATACAGTATTCAGGACCCTACGCCTTCTTTTGAAGACAGAATAATACAACAGGAAGAAGTAAAAATAATCAGAGATATCATTCTTCAAATTGACTCTAAAGAAAAAAGCAAAAGATATTTAGATATATTTATTCTCAGATATTTAAAAGGCTTAAACCAGCTAGAAATATCCTCTGAAATTGGAGTTAGTCAGGGGGAAATTAGCAAGAGGATCACAGAACTTGCTAAAAAAGTTAACAAATATATAGCCTGA
PROTEIN sequence
Length: 188
VELTEKHRNLIENIVKNNPRFIGNEDLADDFCSETFKRAYSIISSFENINNFEIYLNKIASSAILDVLKSSGRLRKSKTGYHKIQEKLVSSTSTYEMDENDNIVYSIQDPTPSFEDRIIQQEEVKIIRDIILQIDSKEKSKRYLDIFILRYLKGLNQLEISSEIGVSQGEISKRITELAKKVNKYIA*