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ACD20_128_7

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 4835..5638

Top 3 Functional Annotations

Value Algorithm Source
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 250.0
  • Bit_score: 168
  • Evalue 2.70e-39
SIGMA70_1 (db=PatternScan db_id=PS00715 from=60 to=73 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=30 to=256 evalue=2.5e-33 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.50e-33

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 804
GTGAGTATAGAGGAATTAACTTTAACTGAAGAGATAAATAGCTGGTTGCAGGAATATAAAAAGGCTGAAAATACTAAGGTTAAAACTCAGCTGAGAGATTTAATCGTTCTTGCCTATTTGCCTTTTGTTAAAAAGATAGCATATGGACTTGCAAGAAGAAGCACTGACCCGATAGAAGACTTAATGCAGATCGGGAGTGTAGGCCTGCTAAAAGCTATTGATCAGTATGATACGAATCTTGGTGCAAGTTTTAAAACTTATGCTACATATCTTATTACAGGCGAAATCAGGCATTATCTGCGTGATAAAGGTAATATGATAAGGGCTCCAAGAGAATTACAAGAACTATCTTTTAGAATTAACCAGCTTATTCAGGAATTAACAACAAAATTGAGCAGGATTCCTACCGATCTTGAAATTTCTGAAGTATTAGAAATCCCTGTTAATAAAGTATCTGAAGTTACCGAAGTAGATAGAAGAAAGCAGATGGTATCTTTAGATCAGGTAGTTTCAGGAAGTAGCGAGAGTGAACAAACTTTTGCTGACAGACTTGTTGACGACAAGTATCAGGATTTTCTCATGGCCCAGGAAGACAGAATTATGCTTGGTGAAGCTGTAGAATTATTAAGTGATTCTTTAAAAGAAGTTATAAAATTGAGCTTTTTTGAAGATCTTAGCCAGAATGATATTGCTAAAAGACTTAATATATCTCAGATGCAAGTTAGTAGACGACTTAAAAAGGCTATAGCAGAGTTGTTTAGGATAATTACTTGTAATCAAAAAACAGTAAAAACAAATTATTAG
PROTEIN sequence
Length: 268
VSIEELTLTEEINSWLQEYKKAENTKVKTQLRDLIVLAYLPFVKKIAYGLARRSTDPIEDLMQIGSVGLLKAIDQYDTNLGASFKTYATYLITGEIRHYLRDKGNMIRAPRELQELSFRINQLIQELTTKLSRIPTDLEISEVLEIPVNKVSEVTEVDRRKQMVSLDQVVSGSSESEQTFADRLVDDKYQDFLMAQEDRIMLGEAVELLSDSLKEVIKLSFFEDLSQNDIAKRLNISQMQVSRRLKKAIAELFRIITCNQKTVKTNY*