ggKbase home page

MEL_A2_1_7

Organism: MEL.A2

partial RP 30 / 55 MC: 2 BSCG 32 / 51 ASCG 0 / 38
Location: 5437..6816

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262901 species="Bacteria; F UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 460.0
  • Bit_score: 738
  • Evalue 7.20e-210
clo:HMPREF0868_0408 mfd; transcription-repair coupling factor (EC:3.6.1.-); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] alias=MEL_C1_C00001G00152 id=162249 tax=MEL_C1 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes similarity UNIREF
DB: UNIREF90
  • Identity: 59.1
  • Coverage: null
  • Bit_score: 551
  • Evalue 2.80e-154
mfd; Transcription-repair coupling factor (TRCFATP-dependent helicase mfd) KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 501.0
  • Bit_score: 181
  • Evalue 4.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fusobacterium sp. CAG:815 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTTTAAAATCAATGAAGATAATATAAGTCCAAATTATGAAGAATTTAGGTTATGTGTAAAAGATGGAACTTCTTTTGCTGTAACCGGTTTAACTTCATTTTTTAGAATATTTCTTTTATCAAAAGTAAGACAGTATTTAAAGAAAAAAGTTTTATTTATAACTTCAACTGAACAAAATGCTTTAAAGTATCAAAGTGATTTGAATACAGTTTTTGATTTAAACTCTTCAGTCATGCCGTTTCAAAACATTTCGATGTATGAGACTGTTTCTCCGAATTTATATGATTATTCTGAGCAAATACAAATCTTAAATAAACAGCCGGAAATAGTAATTTGTCCGGTAAAGGCTTTATTAGAAAAATTTCCAAATACTGATTTTTTCAAGAAAAATACTTTTAAAATAAAAGTTGGGGATAGTATAGATTTAAAAAAACTTGCAAAAAAGTTAATAGATTTAGGATACAAAAAATCGACAATGGTTAATGATATTTCCGAATTTAGTATAAGAGGAGATATCGCAGACATTTATTCTTTGGACAAAAATCCTGTAAGAATAGAGCTTTGGGGAGATGAAGTTGTTGATATAAGATATTTCAATAACGAAACCCAAAAATCTATTGAAAAAGTAAAAGAAGTAAAAATTTTACCTATATATAAATTTATTACTGCAGGTCAAGAAGAAAAGGTAAAAGAATTACAAAAGGATGATATTTTAGAAGATGAAGAAATTCCTGAAGAAAACTATTTTGAAGGGATTGAAGTTTATCAAAATTATTTCAATAAAAACCTTGTTGGAATATTAGATTATTTAGAAGATTATACGATAGTCTTTGATGAAACAGCCGAAATATATTCAAGATACGAATTTTTTAATGATAATTTTGAAAAACAACTGGAAGAAAATTTAAAACAAGGTCTAATAAAGAACTTAGAAGGTAAAAATCATTTTACCTATGAAGAATTTTTGAGAAAAACTTCATATTTTACTAAAATAGGTTTTAACAATTTTATAGATGGGCAAAATGGGGAAATTATTGAATTTAACACCCAGCCTTTGAGAAATTTTGAAGCTGATATTGATTTAATTACAGATTTTATAAAAGAGCATAGCGATTATAAAATAATAATTTCAACGGATTATCCGGAGAGGGTAAAAGAAATTCTTGCAGAAAAAGAAATTTATTCTGTAGAATATGCTGAAAGTATTGTTTGTAACGGCTGTATATTAGAAGATTTTAAAACAATAATTTTTACGGATAGAGAACTTTTCAACAAGCGCTCAAAAGAAATTACAACGACAAAAAAATCTTACTATAAAGAGAAGCCTGATTTTATTGAAAATTGTAGTTCATACAATTCACGGGTTGGGAATTTATAA
PROTEIN sequence
Length: 460
MFKINEDNISPNYEEFRLCVKDGTSFAVTGLTSFFRIFLLSKVRQYLKKKVLFITSTEQNALKYQSDLNTVFDLNSSVMPFQNISMYETVSPNLYDYSEQIQILNKQPEIVICPVKALLEKFPNTDFFKKNTFKIKVGDSIDLKKLAKKLIDLGYKKSTMVNDISEFSIRGDIADIYSLDKNPVRIELWGDEVVDIRYFNNETQKSIEKVKEVKILPIYKFITAGQEEKVKELQKDDILEDEEIPEENYFEGIEVYQNYFNKNLVGILDYLEDYTIVFDETAEIYSRYEFFNDNFEKQLEENLKQGLIKNLEGKNHFTYEEFLRKTSYFTKIGFNNFIDGQNGEIIEFNTQPLRNFEADIDLITDFIKEHSDYKIIISTDYPERVKEILAEKEIYSVEYAESIVCNGCILEDFKTIIFTDRELFNKRSKEITTTKKSYYKEKPDFIENCSSYNSRVGNL*