ggKbase home page

MEL_A2_1

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MEL_A2_1_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

2..796
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:CCY21913.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBP3_9FIRM
xylose isomerase domain-containing protein TIM barrel
MEL_A2_1_2
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

981..1670
DNA (690bp) protein (230aa)
Glycosyl hydrolase family 38 {ECO:0000313|EMBL:CDC07265.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae ba
glycosyl hydrolases family protein
MEL_A2_1_3
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1627..2955
DNA (1329bp) protein (443aa)
Uncharacterized protein {ECO:0000313|EMBL:EGG85143.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Glycosyl hydrolase, family 38 n=2 Tax=Lachnospiraceae RepID=C9L8I3_RUMHA
glycoside hydrolase family protein
MEL_A2_1_4
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(3364..3825)
DNA (462bp) protein (154aa)
Transcriptional regulator {ECO:0000313|EMBL:CDE91579.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium
slyA; MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin alias=MEL_C1_C00002G00135 id=162804 tax=MEL_C1 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
MarR family winged helix-turn-helix transcriptional regulator
MEL_A2_1_5
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

3914..4774
DNA (861bp) protein (287aa)
Efflux transporter outer membrane factor lipoprotein NodT family {ECO:0000313|EMBL:CDE97827.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; env
NodT family RND efflux system outer membrane lipoprotein alias=MEL_A1_C00001G01143 id=152996 tax=MEL_A1 species=Enterobacter asburiae genus=Enterobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria
NodT family RND efflux system outer membrane lipoprotein
MEL_A2_1_6
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

4786..5298
DNA (513bp) protein (171aa)
Putative outer membrane efflux protein {ECO:0000313|EMBL:CDE91578.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S2C5_9PORP alias=MEL_C1_C00002G00134 id=162787 tax=MEL_C1 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes
efflux transporter outer membrane factor lipoprotein
MEL_A2_1_7
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

5437..6816
DNA (1380bp) protein (460aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262901 species="Bacteria; F
clo:HMPREF0868_0408 mfd; transcription-repair coupling factor (EC:3.6.1.-); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] alias=MEL_C1_C00001G00152 id=162249 tax=MEL_C1 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
mfd; Transcription-repair coupling factor (TRCFATP-dependent helicase mfd)
MEL_A2_1_8
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

6773..8794
DNA (2022bp) protein (674aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262901 species="Bacteria; F
cay:CEA_G3220 mfd; Transcription-repair coupling factor, MFD (superfamily II helicase ); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] alias=MEL_A1_C00001G00988 id=152715 tax=MEL_A1 species=Clostridium acetobutylicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
mfd; Transcription-repair-coupling factor (EC:3.6.4.-)
MEL_A2_1_9
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

8811..9962
DNA (1152bp) protein (384aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium;
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] alias=MEL_C1_C00001G00151 id=161908 tax=MEL_C1 species=Helicobacter pylori genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria
PpiC-type peptidylprolyl cis-trans isomerase
MEL_A2_1_10
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

10076..11296
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91641.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
hypothetical protein
MEL_A2_1_11
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(11280..11897)
DNA (618bp) protein (206aa)
Diguanylate cyclase containing PAS/PAC sensor {ECO:0000313|EMBL:CDE91642.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" s
diguanylate cyclase/serine/threonine protein kinase alias=MEL_A1_C00001G01014 id=153141 tax=MEL_A1 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi
diguanylate cyclase containing PAS/PAC sensor (EC:2.7.7.65)
MEL_A2_1_12
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(12060..12869)
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE99725.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
MEL_A2_1_13
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(13081..13338)
DNA (258bp) protein (86aa)
Ycf84 protein {ECO:0000313|EMBL:CDE99726.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:8
MEL_A2_1_14
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(13548..13967)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91650.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
YjgP/YjgQ family permease alias=MEL_A1_C00001G01409 id=152228 tax=MEL_A1 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria
YjgP/YjgQ family permease
MEL_A2_1_15
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(13967..14692)
DNA (726bp) protein (242aa)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:CDE91649.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacteriu
Lipopolysaccharide export system ATP-binding protein LptB n=7 Tax=root RepID=LPTB_THIFE alias=MEL_C1_C00001G01749 id=162409 tax=MEL_C1 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
Fe(3+)-transporting ATPase
MEL_A2_1_16
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(15143..16396)
DNA (1254bp) protein (418aa)
Carboxyl--terminal protease {ECO:0000313|EMBL:CDE92796.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacteri
Carboxyl-terminal-processing protease n=1 Tax=Synechococcus sp. PCC 7002 RepID=CTPA_SYNP2 alias=MEL_C1_C00001G01481 id=162600 tax=MEL_C1 species=Synechococcus sp. PCC 7002 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria
carboxyl--terminal protease
MEL_A2_1_17
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(16442..17101)
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE92800.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
MEL_A2_1_18
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(17174..18748)
DNA (1575bp) protein (525aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE92803.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
hypothetical protein
MEL_A2_1_19
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(18762..19229)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE99721.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_A2_1_20
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(19593..20231)
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE99720.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
MEL_A2_1_21
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(20429..21547)
DNA (1119bp) protein (373aa)
Hypothetical aminotransferase {ECO:0000313|EMBL:CDE91656.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacte
Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0F5_9FIRM alias=MEL_C2_C00002G00109 id=471565 tax=MEL_C2 species=Clostridium spiroforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichi phylum=Firmicutes
transaminase
MEL_A2_1_22
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(21562..22260)
DNA (699bp) protein (233aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91655.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
MEL_A2_1_23
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

22351..23157
DNA (807bp) protein (269aa)
AP endonuclease family 2 {ECO:0000313|EMBL:CDE91654.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium
AP endonuclease alias=ACD20_C00062G00016,ACD20_994.24575.15G0016,ACD20_994.24575.15_16 id=19416 tax=ACD20 species=Campylobacter fetus genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
AP endonuclease
MEL_A2_1_24
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(23059..23907)
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91653.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
MEL_A2_1_25
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(23993..24415)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91652.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
MEL_A2_1_26
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

24620..26293
DNA (1674bp) protein (558aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae;
fnu:FN1464 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] alias=MEL_A1_C00001G01705 id=152953 tax=MEL_A1 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
MEL_A2_1_27
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

26301..27143
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91629.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
4-carboxymuconolactone decarboxylase (EC:4.1.1.44); K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] alias=MEL_C1_C00001G00086 id=162464 tax=MEL_C1 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
carboxymuconolactone decarboxylase
MEL_A2_1_28
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

27279..27695
DNA (417bp) protein (139aa)
Putative transcriptional regulator (MerR family) {ECO:0000313|EMBL:CDE91564.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;
putative MerR family transcriptional regulator
MEL_A2_1_29
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(27781..28236)
DNA (456bp) protein (152aa)
Heat shock protein Hsp20 {ECO:0000313|EMBL:CDE99084.1}; TaxID=1262843 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
small heat shock protein; K13993 HSP20 family protein alias=MEL_C2_C00001G00551 id=471122 tax=MEL_C2 species=Sordaria macrospora genus=Sordaria taxon_order=Sordariales taxon_class=Sordariomycetes phylum=Ascomycota
molecular chaperone (small heat shock protein)
MEL_A2_1_30
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

28347..28910
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE91662.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium s
Acetyltransferase (GNAT) family n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E7B4_9ACTN alias=MEL_C1_C00003G00031 id=162937 tax=MEL_C1 species=Gordonibacter pamelaeae genus=Gordonibacter taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria
C_GCAxxG_C_C family protein
Displaying items 1-30 of 54 in total

View Taxonomy