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MEL_C3_73

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MEL_C3_73_1
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

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comp(1..288)
DNA (288bp) protein (96aa)
(db=HMMPfam db_id=PF04794 from=4 to=89 evalue=1.8e-19 interpro_id=IPR006879 interpro_description=Uncharacterised protein family UPF0249/HpnK)
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDE91765.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" s
Putative molybdopterin converting factor, subunit 2 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL59_9FIRM alias=MEL_A1_C00001G00170 id=152420 tax=MEL_A1 species=Dialister invisus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes
MEL_C3_73_2
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(539..1267)
DNA (729bp) protein (243aa)
glycosyltransferase
seg (db=Seg db_id=seg from=218 to=231)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=13 to=216 evalue=2.1e-25)
(db=HMMPfam db_id=PF00535 from=8 to=173 evalue=4.2e-25 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
MEL_C3_73_3
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

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comp(1257..2459)
DNA (1203bp) protein (401aa)
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
seg (db=Seg db_id=seg from=268 to=279)
seg (db=Seg db_id=seg from=54 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=279 to=301)
MEL_C3_73_4
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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comp(2495..2848)
DNA (354bp) protein (118aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=9 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
MEL_C3_73_5
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria

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3103..4251
DNA (1149bp) protein (383aa)
nucleotidyltransferase/DNA polymerase protein
seg (db=Seg db_id=seg from=354 to=371)
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=1 to=231 evalue=1.1e-70)
DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR11076 from=1 to=348 evalue=1.0e-56)
MEL_C3_73_6
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4575..5159
DNA (585bp) protein (195aa)
seg (db=Seg db_id=seg from=134 to=151)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=70 evalue=1.4e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=5 to=69 evalue=4.6e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=10 to=64 evalue=9.2e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
MEL_C3_73_7
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

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5566..7458
DNA (1893bp) protein (631aa)
N-acetylmuramoyl-L-alanine amidase LytC precursor (EC:3.5.1.28)
seg (db=Seg db_id=seg from=225 to=236)
seg (db=Seg db_id=seg from=121 to=135)
seg (db=Seg db_id=seg from=2 to=20)
MEL_C3_73_8
Clostridium sp. CAG:306, Melainabacteria, Bacteria

Not on your lists

7455..8267
DNA (813bp) protein (271aa)
glutamate racemase (EC:5.1.1.3)
ASP_GLU_RACEMASE_2 (db=PatternScan db_id=PS00924 from=181 to=191 evalue=0.0 interpro_id=IPR018187 interpro_description=Asp/Glu racemase, active site GO=Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855))
GLUTAMATE RACEMASE (db=HMMPanther db_id=PTHR21198 from=2 to=239 evalue=7.2e-62 interpro_id=IPR004391 interpro_description=Glutamate racemase GO=Molecular Function: glutamate racemase activity (GO:0008881), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
glut_race: glutamate racemase (db=HMMTigr db_id=TIGR00067 from=6 to=254 evalue=1.0e-46 interpro_id=IPR004391 interpro_description=Glutamate racemase GO=Molecular Function: glutamate racemase activity (GO:0008881), Biological Process: peptidoglycan biosynthetic process (GO:0009252))
MEL_C3_73_9
Clostridium sp. CAG:306, Melainabacteria, Bacteria

Not on your lists

8326..8883
DNA (558bp) protein (186aa)
translation elongation factor P
EFP (db=PatternScan db_id=PS01275 from=150 to=169 evalue=0.0 interpro_id=IPR013852 interpro_description=Translation elongation factor P/YeiP, conserved site)
efp: translation elongation factor P (db=HMMTigr db_id=TIGR00038 from=2 to=185 evalue=2.9e-117 interpro_id=IPR011768 interpro_description=Translation elongation factor P GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: cytoplasm (GO:0005737), Biological Process: translational elongation (GO:0006414))
Translation elongation factor P (db=HMMPIR db_id=PIRSF005901 from=1 to=185 evalue=1.6e-67 interpro_id=IPR020599 interpro_description=Translation elongation factor P/YeiP)
MEL_C3_73_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

8896..9384
DNA (489bp) protein (163aa)
biotin carboxyl carrier protein
seg (db=Seg db_id=seg from=14 to=29)
BIOTIN (db=PatternScan db_id=PS00188 from=118 to=135 evalue=0.0 interpro_id=IPR001882 interpro_description=Biotin-binding site)
BCCP: acetyl-CoA carboxylase, biotin carboxy (db=HMMTigr db_id=TIGR00531 from=2 to=162 evalue=7.2e-44 interpro_id=IPR001249 interpro_description=Acetyl-CoA biotin carboxyl carrier GO=Molecular Function: acetyl-CoA carboxylase activity (GO:0003989), Biological Process: fatty acid biosynthetic process (GO:0006633), Cellular Component: acetyl-CoA carboxylase complex (GO:0009317))
MEL_C3_73_11
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

9460..10809
DNA (1350bp) protein (450aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.7)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.7)
Putative acyl-CoA carboxylase, alpha subunit n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQK0_9MICO (db=UNIREF evalue=3.2e-99 bit_score=367.9 identity=45.6 coverage=94.0)
CPSASE_1 (db=PatternScan db_id=PS00866 from=152 to=166 evalue=0.0 interpro_id=IPR005479 interpro_description=Carbamoyl-phosphate synthetase, large subunit, ATP-binding GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP binding (GO:0005524), Biological Process: metabolic process (GO:0008152))
MEL_C3_73_12
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(10706..10912)
DNA (207bp) protein (69aa)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=12 to=58 evalue=1.1e-11)
no description (db=Gene3D db_id=G3DSA:3.40.50.2000 from=13 to=59 evalue=3.5e-06)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWF2_Melainabacteria_37_15_curated
Displaying 12 items

View Taxonomy