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MEL_C3_86

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MEL_C3_86_1
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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10..864
DNA (855bp) protein (285aa)
CheY-like (db=superfamily db_id=SSF52172 from=54 to=160 evalue=1.9e-20 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF00072 from=57 to=161 evalue=5.4e-17 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=56 to=160 evalue=2.4e-15)
no description (db=HMMSmart db_id=SM00448 from=55 to=172 evalue=1.5e-13 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
MEL_C3_86_2
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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comp(866..1936)
DNA (1071bp) protein (357aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
seg (db=Seg db_id=seg from=14 to=35)
seg (db=Seg db_id=seg from=98 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
MEL_C3_86_3
Clostridium sp. CAG:306, Melainabacteria, Bacteria

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comp(1943..2896)
DNA (954bp) protein (318aa)
coiled-coil (db=Coil db_id=coil from=148 to=176 evalue=NA)
Glr4115 protein {ECO:0000313|EMBL:CDC21957.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG
MEL_C3_86_4
Clostridium sp. CAG:813, Melainabacteria, Bacteria

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comp(3338..3718)
DNA (381bp) protein (127aa)
ABC transporter ATP-binding protein
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF52 from=1 to=122 evalue=2.4e-52)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=122 evalue=2.4e-52)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=119 evalue=2.8e-32)
MEL_C3_86_5
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

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comp(3718..4059)
DNA (342bp) protein (114aa)
putative ABC transporter ATP-binding protein
seg (db=Seg db_id=seg from=91 to=103)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=3 to=107 evalue=3.1e-32)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=109 evalue=3.6e-25)
MEL_C3_86_6
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

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comp(4131..4937)
DNA (807bp) protein (269aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=247 to=266)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=67 to=80)
MEL_C3_86_7
unknown

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5047..6528
DNA (1482bp) protein (494aa)
seg (db=Seg db_id=seg from=2 to=10)
Displaying 7 items

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