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MEL_C3_77_2

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: 1118..1864

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 232.0
  • Bit_score: 207
  • Evalue 6.30e-51
seg (db=Seg db_id=seg from=132 to=144) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
PSI_RSU (db=PatternScan db_id=PS01149 from=107 to=121 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGTAAGACAAAATAAAATTAAATCTTTAAAACTTAATAAATTTATTGCTCAAAGCGGTTTATGTTCCCGTCGTAAAGCGGATGAGCTTATATTGTCAGGTGTTGTTTTTGTTAACGGTAAAAAAGTTGAAAACTTAGGTGTAGTTGTAACTTCAAAGGATAACGTTGTTGTTGAAGGTAAAGTGATAAAACCTAATAATTTCGTTTATATACGTTTTTATAAGCCTGCTGGGTTTATTACAAGTTCTAATGATGAAAAAGGAAGAAAAACTATTTATGACATATTGCCAGAGGAAGTTAAAAATCTAAAACCGGTTGGACGTTTGGATAAAGATTCATCAGGATTGCTTATTATGACAAATGATGGTGATTTTATAAATGCTTTAACACATCCTAAAATTAAAATACCAAAAGTTTATAAAGTCGTTGTTGAAGGTAAAATGACTCGTCAAAAAGTGCTTGAACTTGAAAATGGTATTGAAATTGAAAAAGGAAAAATAGCTTATGCTCATGTTGATTGTGTTGATGTGCTTTCAGACTCAACTGTTATGCAGATTACTCTTTATCAAGGTTTAAATCGACAAATTCGTAAAATGTGTGAATCTGTCGGACATAAGGTTGTTACTTTAAAAAGAATTAAACATGCAAATGTTGTTCTTGATGGTTTAAAACGTGGTTGTTTTAAATATATTAACCAGAAACAGATTAAAGAAATAGAAGATTATATTAAAAACAAAGCCTCTTAA
PROTEIN sequence
Length: 249
MVRQNKIKSLKLNKFIAQSGLCSRRKADELILSGVVFVNGKKVENLGVVVTSKDNVVVEGKVIKPNNFVYIRFYKPAGFITSSNDEKGRKTIYDILPEEVKNLKPVGRLDKDSSGLLIMTNDGDFINALTHPKIKIPKVYKVVVEGKMTRQKVLELENGIEIEKGKIAYAHVDCVDVLSDSTVMQITLYQGLNRQIRKMCESVGHKVVTLKRIKHANVVLDGLKRGCFKYINQKQIKEIEDYIKNKAS*