ggKbase home page

MEL_C3_40_13

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: 9039..9323

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=82 to=94) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
SIGMA70_1 (db=PatternScan db_id=PS00715 from=68 to=81 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=43 to=82 evalue=4.0e-06 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.00e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Melainabacteria_34_9_curated → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGAAATGTTGAAAAAAATGCAAAATATACCAAACGATGAATTTAATAATGATGACATAATTTTATGGCTTCGCAAATACGAAACAGAAAATGATACGAAGACAAAAAAACATTATGAAACGCTTATTCTAATGGCATACATGCCTCTTGTAAACAGAATTGCAAAAGGTCTTGCAAGACGAAGTACTGACCCTATAGAGGATATAATTCAAGTTGGTGCTTTGGGATTAATAAAAGCTATAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGA
PROTEIN sequence
Length: 95
MEMLKKMQNIPNDEFNNDDIILWLRKYETENDTKTKKHYETLILMAYMPLVNRIAKGLARRSTDPIEDIIQVGALGLIKAINXXXXXXXXXXXX*