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13_1_20cm_4_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 438 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_0_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(641..1030)
DNA (390bp) protein (130aa)
vacuolar-type H+ATPase subunit A n=1 Tax=Chryseobacterium taeanense RepID=UPI0002DAE55F
Uncharacterized protein {ECO:0000313|EMBL:AGH83614.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacear
hypothetical protein
13_1_20cm_4_scaffold_0_2
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1375..3252)
DNA (1878bp) protein (626aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FC4E48 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM67135.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
AAA domain protein
13_1_20cm_4_scaffold_0_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3249..3746)
DNA (498bp) protein (166aa)
threonine transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI000365CCF9 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51664.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
putative threonine efflux protein rbh
13_1_20cm_4_scaffold_0_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3743..4831)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003663AB7 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51663.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_20cm_4_scaffold_0_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4828..5823)
DNA (996bp) protein (332aa)
restriction endonuclease n=1 Tax=Chryseobacterium taeanense RepID=UPI00030255C6 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51662.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_20cm_4_scaffold_0_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5896..6219)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000366C473
Plasmid pAcX50c, complete sequence {ECO:0000313|EMBL:AJE23504.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotob
putative plasmid maintenance system antidote protein, XRE family
13_1_20cm_4_scaffold_0_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6451..7587)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003753506 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51661.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_20cm_4_scaffold_0_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7584..8783)
DNA (1200bp) protein (400aa)
integrase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003793CF8 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51660.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
integrase family protein
13_1_20cm_4_scaffold_0_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9022..10137)
DNA (1116bp) protein (372aa)
Acyl-CoA dehydrogenase domain protein n=2 Tax=Delftia RepID=A9BNV9_DELAS rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABX38004.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_0_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10207..11388)
DNA (1182bp) protein (394aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Acyl-CoA dehydrogenase domain protein n=2 Tax=Delftia RepID=A9BNV8_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ12246.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseud
13_1_20cm_4_scaffold_0_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11542..12222)
DNA (681bp) protein (227aa)
UPF0502 protein Daci_5373 n=2 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=Y5373_DELAS rbh
UPF0502 protein Daci_5373 {ECO:0000255|HAMAP-Rule:MF_01584}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
hypothetical protein
13_1_20cm_4_scaffold_0_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12321..12899
DNA (579bp) protein (193aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2) rbh
Phosphoribosylglycinamide formyltransferase n=2 Tax=Delftia RepID=A9BNV6_DELAS rbh
13_1_20cm_4_scaffold_0_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12907..13179)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNV5_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX38000.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_0_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13272..14600
DNA (1329bp) protein (443aa)
Fmu (Sun) domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNV4_DELAS rbh
Fmu (Sun) domain protein {ECO:0000313|EMBL:ABX37999.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (str
Fmu (Sun) domain-containing protein
13_1_20cm_4_scaffold_0_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14716..15939
DNA (1224bp) protein (408aa)
Fatty acid desaturase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNV3_DELAS rbh
Fatty acid desaturase {ECO:0000313|EMBL:ABX37998.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain
fatty acid desaturase
13_1_20cm_4_scaffold_0_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15914..16282)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNV2_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX37997.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_0_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16495..17979
DNA (1485bp) protein (495aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNV1_DELAS rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ABX37996.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
transcriptional regulator
13_1_20cm_4_scaffold_0_18
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18100..18270)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=4 Tax=Delftia RepID=RL33_DELAS
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313
50S ribosomal protein L33
13_1_20cm_4_scaffold_0_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18291..18524)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=4 Tax=Delftia RepID=RL28_DELAS
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
rpmB; 50S ribosomal protein L28
13_1_20cm_4_scaffold_0_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18793..19746)
DNA (954bp) protein (318aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
Thioredoxin reductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU8_DELAS rbh
thioredoxin reductase
13_1_20cm_4_scaffold_0_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20084..22372
DNA (2289bp) protein (763aa)
Cell divisionFtsK/SpoIIIE n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU7_DELAS rbh
Cell divisionFtsK/SpoIIIE {ECO:0000313|EMBL:ABX37992.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (st
cell division protein FtsK
13_1_20cm_4_scaffold_0_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22402..23037
DNA (636bp) protein (212aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU6_DELAS rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
outer membrane lipoprotein carrier protein LolA
13_1_20cm_4_scaffold_0_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23206..24732
DNA (1527bp) protein (509aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU5_DELAS rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABX37990.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="De
methyl-accepting chemotaxis sensory transducer
13_1_20cm_4_scaffold_0_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24719..26032)
DNA (1314bp) protein (438aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU4_DELAS rbh
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ABX37989.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delfti
branched-chain amino acid transport system II carrier protein
13_1_20cm_4_scaffold_0_25
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26476..27780
DNA (1305bp) protein (435aa)
AAA ATPase central domain protein n=2 Tax=Delftia RepID=A9BNU3_DELAS rbh
AAA ATPase central domain protein {ECO:0000313|EMBL:AEF88284.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (st
recombination factor protein RarA
13_1_20cm_4_scaffold_0_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27813..28262)
DNA (450bp) protein (150aa)
Transcriptional regulator, HxlR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU2_DELAS rbh
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ABX37987.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
HxlR family transcriptional regulator
13_1_20cm_4_scaffold_0_27
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28353..29081
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU1_DELAS rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EZP48372.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_0_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29162..29767
DNA (606bp) protein (202aa)
DSBA oxidoreductase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNU0_DELAS rbh
DSBA oxidoreductase {ECO:0000313|EMBL:ABX37985.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
DSBA oxidoreductase
13_1_20cm_4_scaffold_0_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29776..30123)
DNA (348bp) protein (116aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BNT9_DELAS
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:ABX37984.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source=
glutathione-dependent formaldehyde-activating protein
13_1_20cm_4_scaffold_0_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30429..31358
DNA (930bp) protein (310aa)
Inner-membrane translocator n=2 Tax=Delftia RepID=A9BNT8_DELAS rbh
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KFJ11813.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
ABC transporter permease
Displaying items 1-30 of 438 in total

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