ggKbase home page

13_1_20cm_4_scaffold_112

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_112_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
Conjugal transfer protein TrbC n=3 Tax=Bacteria RepID=A9BPW4_DELAS
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KEH08427.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhaten
conjugal transfer protein TrbC
13_1_20cm_4_scaffold_112_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263..1324)
DNA (1062bp) protein (354aa)
P-type conjugative transfer ATPase TrbB n=3 Tax=Bacteria RepID=A9BPW5_DELAS rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EPD45493.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
P-type conjugative transfer ATPase TrbB
13_1_20cm_4_scaffold_112_3
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1321..1785)
DNA (465bp) protein (155aa)
CopG domain protein DNA-binding domain protein n=2 Tax=Delftia acidovorans RepID=A9BPW6_DELAS
CopG family transcriptional regulator {ECO:0000313|EMBL:KEH08429.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsu
CopG/DNA-binding domain-containing protein
13_1_20cm_4_scaffold_112_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1782..3803)
DNA (2022bp) protein (674aa)
TRAG family protein n=2 Tax=Delftia acidovorans RepID=A9BPW7_DELAS rbh
TRAG family protein {ECO:0000313|EMBL:ABX33086.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
conjugal transfer coupling protein TraG rbh
13_1_20cm_4_scaffold_112_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4021..4248)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X1C3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD45496.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_112_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4262..5188)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPW9_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX33088.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator rbh
13_1_20cm_4_scaffold_112_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5336..5620)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XZG8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44919.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_112_8
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5749..6675)
DNA (927bp) protein (309aa)
Copper resistance D domain protein n=3 Tax=Betaproteobacteria RepID=A9BPX1_DELAS rbh
Putative copper resistance D transmembrane protein, CopD {ECO:0000313|EMBL:EGK70625.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversa
copper resistance D domain-containing protein
13_1_20cm_4_scaffold_112_9
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6680..7066)
DNA (387bp) protein (129aa)
Copper resistance protein CopC n=11 Tax=Proteobacteria RepID=A9BPX2_DELAS
Copper resistance protein C {ECO:0000313|EMBL:EPX97100.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU
copC; copper resistance protein CopC
13_1_20cm_4_scaffold_112_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7208..9646)
DNA (2439bp) protein (813aa)
Heavy metal translocating P-type ATPase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPX3_DELAS rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABX33092.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
heavy metal translocating P-type ATPase
13_1_20cm_4_scaffold_112_11
Achromobacter sp. AO22, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9801..10073)
DNA (273bp) protein (91aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=A9BPX4_DELAS
CopO {ECO:0000313|EMBL:ADN85629.1}; TaxID=554819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. AO22.;"
hypothetical protein
13_1_20cm_4_scaffold_112_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10107..10592)
DNA (486bp) protein (162aa)
Uncharacterized protein n=21 Tax=Proteobacteria RepID=A9BPX5_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX33094.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
CopG protein
13_1_20cm_4_scaffold_112_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10630..11610)
DNA (981bp) protein (327aa)
Copper resistance B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPX6_DELAS rbh
Copper resistance B {ECO:0000313|EMBL:ABX33095.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
copper resistance B rbh
13_1_20cm_4_scaffold_112_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11636..13537)
DNA (1902bp) protein (634aa)
Copper-resistance protein, CopA family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPX7_DELAS rbh
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ABX33096.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
CopA family copper resistance protein
13_1_20cm_4_scaffold_112_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13781..14485
DNA (705bp) protein (235aa)
transcriptional regulator n=1 Tax=Brachymonas chironomi RepID=UPI000372E43F rbh
Transcriptional activator protein CopR {ECO:0000313|EMBL:EPD44928.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
two component heavy metal response transcriptional regulator
13_1_20cm_4_scaffold_112_16
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14457..15890
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Meth
Heavy metal sensor signal transduction histidine kinase n=3 Tax=Betaproteobacteria RepID=A9BPX9_DELAS rbh
heavy metal sensor signal transduction histidine kinase rbh
13_1_20cm_4_scaffold_112_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15967..17949)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPY0_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX33099.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_112_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18398..18985)
DNA (588bp) protein (196aa)
Conjugative transfer signal peptidase TraF n=2 Tax=Delftia acidovorans RepID=S2WZI3_DELAC rbh
Putative conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:ABX33100.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" sou
putative conjugal transfer TRAF transmembrane protein
13_1_20cm_4_scaffold_112_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18982..19539)
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=A9BR43_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX33101.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_112_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19536..19811)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=A9BR44_DELAS
Uncharacterized protein {ECO:0000313|EMBL:EPD44933.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_112_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19808..20446)
DNA (639bp) protein (213aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=Delftia acidovorans RepID=A9BR45_DELAS rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EPD44934.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
cobyrinic acid ac-diamide synthase rbh
13_1_20cm_4_scaffold_112_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20700..21557)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2X413_DELAC rbh
RepA replication protein {ECO:0000313|EMBL:KEH06964.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative replication initiator and transcription repressor protein
13_1_20cm_4_scaffold_112_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21584..21874)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WZI7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44936.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
Displaying 23 items

View Taxonomy