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13_1_20cm_4_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154..1638)
DNA (1485bp) protein (495aa)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:ABX35807.1}; EC=1.1.99.3 {ECO:0000313|EMBL:ABX35807.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU92_DELAS rbh
13_1_20cm_4_scaffold_4_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1644..2231)
DNA (588bp) protein (196aa)
(2Fe-2S)-binding domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU93_DELAS rbh
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABX35808.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
2Fe-2S iron-sulfur cluster-binding domain-containing protein
13_1_20cm_4_scaffold_4_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2228..5149)
DNA (2922bp) protein (974aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU94_DELAS rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ABX35809.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; De
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit rbh
13_1_20cm_4_scaffold_4_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5583..6629
DNA (1047bp) protein (349aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter related n=2 Tax=Delftia RepID=A9BU95_DELAS rbh
13_1_20cm_4_scaffold_4_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6633..7298
DNA (666bp) protein (222aa)
Binding-protein-dependent transport systems inner membrane component n=5 Tax=cellular organisms RepID=A9BU96_DELAS rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEF90535.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
ABC transporter permease rbh
13_1_20cm_4_scaffold_4_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7378..8187
DNA (810bp) protein (270aa)
Lipoprotein n=3 Tax=Delftia acidovorans RepID=A9BU97_DELAS rbh
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
YaeC family lipoprotein
13_1_20cm_4_scaffold_4_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8192..8722
DNA (531bp) protein (177aa)
Acireductone dioxygenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=MTND_DELAS rbh
Acireductone dioxygenase {ECO:0000255|HAMAP-Rule:MF_01682}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000255|HAMAP-Rule:MF_01682}; Short=DHK-MTPene dioxygenase {ECO:0000255|HAMAP-Rule
acireductone dioxygenase ARD
13_1_20cm_4_scaffold_4_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8719..9819
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVZ8_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35814.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein rbh
13_1_20cm_4_scaffold_4_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9879..10922)
DNA (1044bp) protein (348aa)
Bile acid:sodium symporter n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BVZ9_DELAS rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:ABX35815.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (s
bile acid:sodium symporter
13_1_20cm_4_scaffold_4_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11041..11958
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW00_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX35816.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator
13_1_20cm_4_scaffold_4_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11933..13306)
DNA (1374bp) protein (458aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:ABX35817.1}; EC=4.2.1.40 {ECO:0000313|EMBL:ABX35817.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteob
D-tagatose-bisphosphate aldolase non-catalytic subunit (EC:4.1.2.40)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW01_DELAS rbh
13_1_20cm_4_scaffold_4_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13311..14279)
DNA (969bp) protein (323aa)
PfkB domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW02_DELAS rbh
PfkB domain protein {ECO:0000313|EMBL:ABX35818.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
ribokinase-like domain-containing protein
13_1_20cm_4_scaffold_4_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14340..15386)
DNA (1047bp) protein (349aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ABX35819.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABX35819.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW03_DELAS rbh
13_1_20cm_4_scaffold_4_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15383..16885)
DNA (1503bp) protein (501aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW04_DELAS rbh
ABC transporter related {ECO:0000313|EMBL:ABX35820.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
ABC transporter-like protein
13_1_20cm_4_scaffold_4_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16966..17892)
DNA (927bp) protein (309aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW05_DELAS rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ABX35821.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;
periplasmic-binding protein/LacI transcriptional regulator
13_1_20cm_4_scaffold_4_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17927..18736)
DNA (810bp) protein (270aa)
Transcriptional regulator, DeoR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW06_DELAS rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABX35822.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
DeoR family transcriptional regulator
13_1_20cm_4_scaffold_4_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18847..19578)
DNA (732bp) protein (244aa)
Glutamine amidotransferase class-I n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW07_DELAS rbh
Glutamine amidotransferase class-I {ECO:0000313|EMBL:ABX35823.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidov
class I glutamine amidotransferase
13_1_20cm_4_scaffold_4_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19762..21822)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW08_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35824.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_4_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22196..23098)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW09_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35825.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_4_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23113..23682
DNA (570bp) protein (190aa)
Transcriptional regulator, XRE family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW10_DELAS rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABX35826.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
XRE family transcriptional regulator
13_1_20cm_4_scaffold_4_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23918..25078)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW11_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35827.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_4_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25071..25706)
DNA (636bp) protein (212aa)
Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW12_DELAS rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:ABX35828.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
aspartyl/asparaginyl beta-hydroxylase
13_1_20cm_4_scaffold_4_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25703..26389)
DNA (687bp) protein (229aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-R
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW13_DELAS rbh
13_1_20cm_4_scaffold_4_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27109..28350
DNA (1242bp) protein (414aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW14_DELAS rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX35830.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
major facilitator transporter
13_1_20cm_4_scaffold_4_25

Not on your lists

28347..28490
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH98109.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_20cm_4_scaffold_4_trna_2
unknown

Not on your lists

comp(28400..28472)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_4_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28499..29506)
DNA (1008bp) protein (336aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
Fructose-1,6-bisphosphatase class 1 n=2 Tax=Delftia acidovorans RepID=F16PA_DELAS rbh
fructose-1,6-bisphosphatase
13_1_20cm_4_scaffold_4_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29557..32283)
DNA (2727bp) protein (909aa)
Aminopeptidase N n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW86_DELAS rbh
Aminopeptidase N {ECO:0000313|EMBL:ABX35902.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM
pepN; aminopeptidase N
13_1_20cm_4_scaffold_4_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32361..33410)
DNA (1050bp) protein (350aa)
Peptide chain release factor 2 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW87_DELAS rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=398578 species="Bacteria; Proteobacteria; Betaprot
peptide chain release factor 2
13_1_20cm_4_scaffold_4_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33781..35631)
DNA (1851bp) protein (617aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW88_DELAS rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABX35904.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="De
methyl-accepting chemotaxis sensory transducer
Displaying items 1-30 of 292 in total

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