ggKbase home page

13_1_20cm_4_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 506 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5_1
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Protocatechuate 4,5-dioxygenase {ECO:0000313|EMBL:AEF90016.1}; EC=1.13.11.8 {ECO:0000313|EMBL:AEF90016.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
protocatechuate 4,5-dioxygenase subunit beta (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLF9_DELAS
13_1_20cm_4_scaffold_5_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330..737)
DNA (408bp) protein (136aa)
Protocatechuate 4,5-dioxygenase, alpha subunit {ECO:0000313|EMBL:ABX36445.1}; EC=1.13.11.8 {ECO:0000313|EMBL:ABX36445.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase, alpha subunit n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG0_DELAS
13_1_20cm_4_scaffold_5_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(776..2116)
DNA (1341bp) protein (447aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG1_DELAS rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX36446.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
major facilitator transporter
13_1_20cm_4_scaffold_5_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2410..4662)
DNA (2253bp) protein (751aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG2_DELAS rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ABX36447.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; De
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit rbh
13_1_20cm_4_scaffold_5_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4667..5617)
DNA (951bp) protein (317aa)
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG3_DELAS rbh
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:ABX36448.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
molybdopterin dehydrogenase FAD-binding
13_1_20cm_4_scaffold_5_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5614..6258)
DNA (645bp) protein (215aa)
(2Fe-2S)-binding domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG4_DELAS rbh
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABX36449.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
2Fe-2S iron-sulfur cluster-binding domain-containing protein
13_1_20cm_4_scaffold_5_7
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6505..12123)
DNA (5619bp) protein (1873aa)
AAA ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARG6_DELSC rbh
AAA ATPase {ECO:0000313|EMBL:EZP53786.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
AAA ATPase
13_1_20cm_4_scaffold_5_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12227..14302)
DNA (2076bp) protein (692aa)
Band 7 protein n=2 Tax=Delftia RepID=A9BLG6_DELAS rbh
Band 7 protein {ECO:0000313|EMBL:ABX36451.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14
hypothetical protein
13_1_20cm_4_scaffold_5_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14401..15069)
DNA (669bp) protein (223aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG7_DELAS rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 {ECO:0000313|EMBL:ABX36452.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;"
ubiquinone biosynthesis hydroxylase UbiH/UbiF/VisC/COQ6
13_1_20cm_4_scaffold_5_10
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15144..15854)
DNA (711bp) protein (237aa)
Phage shock protein A, PspA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG8_DELAS rbh
Phage shock protein A, PspA {ECO:0000313|EMBL:EZP53789.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;
phage shock protein A
13_1_20cm_4_scaffold_5_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15896..16564)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLG9_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX36454.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_5_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16882..19452
DNA (2571bp) protein (857aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH0_DELAS rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABX36455.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
diguanylate cyclase/phosphodiesterase
13_1_20cm_4_scaffold_5_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19610..20617
DNA (1008bp) protein (336aa)
Diacylglycerol kinase catalytic region n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH1_DELAS rbh
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ABX36456.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
diacylglycerol kinase catalytic subunit
13_1_20cm_4_scaffold_5_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20641..21456
DNA (816bp) protein (272aa)
Metallophosphoesterase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH2_DELAS rbh
Metallophosphoesterase {ECO:0000313|EMBL:ABX36457.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strai
metallophosphoesterase
13_1_20cm_4_scaffold_5_15
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21642..22010
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH3_DELAS
Response regulator receiver protein {ECO:0000313|EMBL:EZP53794.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp.
response regulator receiver protein
13_1_20cm_4_scaffold_5_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22056..23234)
DNA (1179bp) protein (393aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH4_DELAS rbh
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABX36459.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
response regulator receiver sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_5_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23235..23849)
DNA (615bp) protein (205aa)
CheB methylesterase {ECO:0000313|EMBL:ABX36460.1}; EC=3.1.1.61 {ECO:0000313|EMBL:ABX36460.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delf
CheB methylesterase (EC:3.1.1.61) rbh
CheB methylesterase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH5_DELAS rbh
13_1_20cm_4_scaffold_5_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23849..24688)
DNA (840bp) protein (280aa)
MCP methyltransferase, CheR-type n=2 Tax=Delftia RepID=A9BLH6_DELAS rbh
CheR methyltransferase, all-alpha domain protein {ECO:0000313|EMBL:KFJ12849.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="D
CheR-type MCP methyltransferase
13_1_20cm_4_scaffold_5_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24702..28235)
DNA (3534bp) protein (1178aa)
GAF sensor hybrid histidine kinase {ECO:0000313|EMBL:ABX36462.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABX36462.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
GAF sensor hybrid histidine kinase (EC:2.7.13.3) rbh
GAF sensor hybrid histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH7_DELAS rbh
13_1_20cm_4_scaffold_5_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28453..28842
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH8_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX36463.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_5_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28949..29356
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLH9_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX36464.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_5_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29403..31190)
DNA (1788bp) protein (596aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI0_DELAS rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABX36465.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="De
methyl-accepting chemotaxis sensory transducer
13_1_20cm_4_scaffold_5_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31232..32068)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI1_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX36466.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_5_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32292..33029)
DNA (738bp) protein (246aa)
Transcriptional regulator, GntR family n=2 Tax=Delftia RepID=A9BLI2_DELAS rbh
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KFJ13062.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
GntR family transcriptional regulator
13_1_20cm_4_scaffold_5_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33844..34326)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI3_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX36468.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_5_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34941..37004
DNA (2064bp) protein (688aa)
Serine/threonine protein kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI4_DELAS rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:ABX36469.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovora
serine/threonine protein kinase
13_1_20cm_4_scaffold_5_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37014..37802
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI5_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX36470.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_5_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37805..38299
DNA (495bp) protein (165aa)
Tetratricopeptide TPR_2 repeat protein n=2 Tax=Delftia RepID=A9BLI6_DELAS rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABX36471.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
hypothetical protein
13_1_20cm_4_scaffold_5_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38342..40387
DNA (2046bp) protein (682aa)
FHA domain containing protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI7_DELAS rbh
FHA domain containing protein {ECO:0000313|EMBL:ABX36472.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans
FHA domain-containing protein
13_1_20cm_4_scaffold_5_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40384..41172
DNA (789bp) protein (263aa)
Protein serine/threonine phosphatase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLI8_DELAS rbh
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ABX36473.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
protein serine/threonine phosphatase
Displaying items 1-30 of 506 in total

View Taxonomy