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13_1_20cm_4_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_53_1
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Protocatechuate 4,5-dioxygenase {ECO:0000313|EMBL:EZP56046.1}; EC=1.13.11.8 {ECO:0000313|EMBL:EZP56046.1};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
protocatechuate 4,5-dioxygenase subunit beta (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase beta subunit n=1 Tax=Pseudomonas sp. K82 RepID=Q1WCM6_9PSED
13_1_20cm_4_scaffold_53_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332..790)
DNA (459bp) protein (153aa)
Protocatechuate 4,5-dioxygenase, alpha subunit {ECO:0000313|EMBL:ABX37076.1}; EC=1.13.11.8 {ECO:0000313|EMBL:ABX37076.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase, alpha subunit n=2 Tax=Delftia RepID=A9C0K3_DELAS rbh
13_1_20cm_4_scaffold_53_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(839..1756)
DNA (918bp) protein (306aa)
Amidohydrolase 2 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0K4_DELAS rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ABX37077.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM
amidohydrolase 2
13_1_20cm_4_scaffold_53_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1767..2450)
DNA (684bp) protein (228aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=4 Tax=Bacteria RepID=A9C0K5_DELAS rbh
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:EPD34406.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
hypothetical protein
13_1_20cm_4_scaffold_53_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2484..3512)
DNA (1029bp) protein (343aa)
Amidohydrolase 2 n=2 Tax=Delftia RepID=A9C0K6_DELAS rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ABX37079.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM
amidohydrolase 2
13_1_20cm_4_scaffold_53_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3562..4944)
DNA (1383bp) protein (461aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0K7_DELAS rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX37080.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
major facilitator transporter
13_1_20cm_4_scaffold_53_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5046..6170)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0K8_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX37081.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_53_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6351..6869)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0K9_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP56053.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
13_1_20cm_4_scaffold_53_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7054..8064)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L0_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX37083.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_53_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8061..8924)
DNA (864bp) protein (288aa)
Amidohydrolase 2 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L1_DELAS rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ABX37084.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM
amidohydrolase 2
13_1_20cm_4_scaffold_53_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9047..9934
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L2_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX37085.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator
13_1_20cm_4_scaffold_53_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10080..10856
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L3_DELAS rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABX37086.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
short chain dehydrogenase
13_1_20cm_4_scaffold_53_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10925..11413)
DNA (489bp) protein (163aa)
Rhs element Vgr protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L4_DELAS rbh
Rhs element Vgr protein {ECO:0000313|EMBL:ABX37087.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
rhs element Vgr protein
13_1_20cm_4_scaffold_53_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12094..12519
DNA (426bp) protein (142aa)
Ferric uptake regulator, Fur family n=2 Tax=Delftia RepID=A9C0L5_DELAS
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABX37088.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
Fur family ferric uptake regulator
13_1_20cm_4_scaffold_53_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12634..13998)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L6_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX37089.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_53_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13995..15422)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L7_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX37090.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_53_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15419..16240)
DNA (822bp) protein (274aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L8_DELAS rbh
ABC transporter related {ECO:0000313|EMBL:ABX37091.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
ABC transporter-like protein rbh
13_1_20cm_4_scaffold_53_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16249..18459)
DNA (2211bp) protein (737aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0L9_DELAS rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ABX37092.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
TonB-dependent siderophore receptor rbh
13_1_20cm_4_scaffold_53_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18577..18966)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0M0_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX37093.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_53_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19101..19715)
DNA (615bp) protein (205aa)
Transcriptional regulator, TetR family n=2 Tax=Delftia RepID=A9C0M1_DELAS rbh
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KFJ08583.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
TetR family transcriptional regulator
13_1_20cm_4_scaffold_53_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20483..20761
DNA (279bp) protein (93aa)
Histone family protein nucleoid-structuring protein H-NS n=2 Tax=Delftia RepID=A9C0M2_DELAS
H-NS histone family protein {ECO:0000313|EMBL:KFJ08636.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (P
histone family protein nucleoid-structuring protein H-NS
13_1_20cm_4_scaffold_53_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20816..21220)
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=2 Tax=Delftia RepID=A9C0M3_DELAS
Endoribonuclease L-PSP family protein {ECO:0000313|EMBL:KFJ08594.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
endoribonuclease L-PSP
13_1_20cm_4_scaffold_53_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21225..21677)
DNA (453bp) protein (151aa)
Thioesterase superfamily protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0M4_DELAS rbh
Thioesterase superfamily protein {ECO:0000313|EMBL:ABX37097.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovor
thioesterase superfamily protein
13_1_20cm_4_scaffold_53_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21687..23327)
DNA (1641bp) protein (547aa)
AMP-dependent synthetase and ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0M5_DELAS rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABX37098.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
AMP-dependent synthetase/ligase
13_1_20cm_4_scaffold_53_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23369..24538)
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0M6_DELAS rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABX37099.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_53_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24541..25398)
DNA (858bp) protein (286aa)
Enoyl-CoA hydratase/isomerase n=3 Tax=Delftia RepID=A9C0M7_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35037.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
enoyl-CoA hydratase
13_1_20cm_4_scaffold_53_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25444..26256)
DNA (813bp) protein (271aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0M8_DELAS rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABX37101.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_53_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26253..28601)
DNA (2349bp) protein (783aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0M9_DELAS rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABX37102.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
salicylyl-CoA 5-hydroxylase
13_1_20cm_4_scaffold_53_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28789..29043
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0N0_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX37103.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_53_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29040..29786
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C0N1_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX37104.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
Displaying items 1-30 of 33 in total

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