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13_1_20cm_4_scaffold_1_16

Organism: 13_1_20CM_4_Delftia_acidovorans_67_18

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(18641..19663)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVF8_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 340.0
  • Bit_score: 675
  • Evalue 2.30e-191
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43421.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 340.0
  • Bit_score: 675
  • Evalue 3.20e-191
retron reverse transcriptase similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 323.0
  • Bit_score: 460
  • Evalue 4.30e-127

Lists

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Notes

Around here begins a large change in GC content and repeats >17 incidence, continues to ~58 kbp Jill Banfield (9/24/21)

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGAGCCTCTGCCTGAGCAAACCGAGCTACCAAGCTAAGCCGATTCGGTCCATTGCCGCGCTGGCCCGAGCCTTGCGCTGGGGCGAACAAGCGCTTGTGCAGTTGGCGGACCGCTCTGAAAGCATGTGGCGGACGGTCAAGCCCCAGCCGGGATCGACCAGGCAGACCTTCGATGCGATGGGGCAGCTCAAAGAATTACATACACGCTTGAAGCTGCATATTTTTTCGAAAGTTGTGTTCCCAGACTACCTGCAAGGCAGCCTCGCGGGACGCGATTACGTCACCAATGCCTCGCTTCATGCAAAGAAAAAAATACTCATCTGCGAGGACGTAAAGCGTTTTTTCCCTTCTGTGGGGGCGATTTACATCGAGCAGGTCTGGCGCGATTGCTTGGGCTTTGCTCCGGATGTCGCCCGGCTGTTAACCAAGCTGACAACCAAAGGGGGCTACCTTCCACAAGGGGCCATCACCAGCTCGTTCTTGGCCAATCTGGTGCTGTGGCGCCATGAGCCCCTGCTGCATGCCAAGCTCAAGCAACGTGGCATCAGCTACTCACGCTATGTGGATGACATGGCCTTGTCTTCTGCCAGTCATTTGGACAAGGACACACAAACCTGGGCCATTGCCCAGGTGTATGGGATGCTTGCTCGCCACGACTTGAAGGCCAGTCGGGACAAGCATGATGTGTTCGCAGCGTCCCGCCCGATGATCGCCACGAAGCTCATCGTGAATCACAGCCCGTCCTTGGGCGCAAAGAAGCGGTCACAGGTGCGAGCTCAAGTCCTGCAGTTGGAGATGGCTGCAGCCAGTGTCGTAGATGCCGATCAGATCCGAGGCCTTGCGAACAAGGCAGCTCAACGGGTCGGCCAATTGGGGCGATTCCACAAGACAGCTGCAGCACACCTTAAAAGCCGCATCGCCACTGTCCGGGATACTTTGACTGCAGATAGCAGAGTTGCCATAACAGGGGAGCGGGCCGCTCACTGGGAGCATTTAGAAGGAGAGAATCCCTGGTCATACTAG
PROTEIN sequence
Length: 341
MSLCLSKPSYQAKPIRSIAALARALRWGEQALVQLADRSESMWRTVKPQPGSTRQTFDAMGQLKELHTRLKLHIFSKVVFPDYLQGSLAGRDYVTNASLHAKKKILICEDVKRFFPSVGAIYIEQVWRDCLGFAPDVARLLTKLTTKGGYLPQGAITSSFLANLVLWRHEPLLHAKLKQRGISYSRYVDDMALSSASHLDKDTQTWAIAQVYGMLARHDLKASRDKHDVFAASRPMIATKLIVNHSPSLGAKKRSQVRAQVLQLEMAAASVVDADQIRGLANKAAQRVGQLGRFHKTAAAHLKSRIATVRDTLTADSRVAITGERAAHWEHLEGENPWSY*