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13_1_20cm_4_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 394 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..769
DNA (768bp) protein (256aa)
YD repeat protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQZ0_DELAS rbh
YD repeat protein {ECO:0000313|EMBL:ABX32945.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM
YD repeat-containing protein
13_1_20cm_4_scaffold_1_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1966..2829
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY8_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32943.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_1_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2898..4226)
DNA (1329bp) protein (443aa)
Sulfatase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY7_DELAS rbh
Sulfatase {ECO:0000313|EMBL:ABX32942.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 /
sulfatase rbh
13_1_20cm_4_scaffold_1_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4312..5289)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY6_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32941.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_1_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5392..5907
DNA (516bp) protein (172aa)
Transcriptional regulator, MarR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY5_DELAS rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABX32940.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
MarR family transcriptional regulator
13_1_20cm_4_scaffold_1_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5929..7362)
DNA (1434bp) protein (478aa)
Aldehyde Dehydrogenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY4_DELAS rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ABX32939.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strai
aldehyde dehydrogenase
13_1_20cm_4_scaffold_1_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7379..8188)
DNA (810bp) protein (270aa)
2-dehydro-3-deoxyglucarate aldolase {ECO:0000313|EMBL:ABX32938.1}; EC=4.1.2.20 {ECO:0000313|EMBL:ABX32938.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY3_DELAS rbh
13_1_20cm_4_scaffold_1_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9387)
DNA (1188bp) protein (396aa)
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=883100 species="Bacteria; Proteobacter
L-rhamnonate dehydratase n=3 Tax=Delftia acidovorans RepID=RHMD_DELAS rbh
mandelate racemase/muconate lactonizing protein
13_1_20cm_4_scaffold_1_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9417..10712)
DNA (1296bp) protein (432aa)
Major facilitator superfamily MFS_1 n=2 Tax=Delftia RepID=A9BQY1_DELAS rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEF87338.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (
major facilitator superfamily protein
13_1_20cm_4_scaffold_1_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10917..11936
DNA (1020bp) protein (340aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQY0_DELAS rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX32935.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac
LysR family transcriptional regulator
13_1_20cm_4_scaffold_1_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11924..13330)
DNA (1407bp) protein (469aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQX9_DELAS rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ABX32934.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
transcriptional regulator
13_1_20cm_4_scaffold_1_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13449..14738
DNA (1290bp) protein (430aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=398578 sp
hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.88)
3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative n=2 Tax=cellular organisms RepID=B9TFK3_RICCO rbh
13_1_20cm_4_scaffold_1_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14780..15205
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQX7_DELAS
Uncharacterized protein {ECO:0000313|EMBL:ABX32932.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein
13_1_20cm_4_scaffold_1_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15207..16589
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQX6_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32931.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
hypothetical protein rbh
13_1_20cm_4_scaffold_1_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16756..17832
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D50B57 rbh
Magnesium chelatase {ECO:0000313|EMBL:EPD43418.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 1583
Mg chelatase subunit ChlI
13_1_20cm_4_scaffold_1_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18641..19663)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVF8_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43421.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
retron reverse transcriptase
Around here begins a large change in GC content and repeats >17 incidence, continues to ~58 kbp Jill Banfield (9/24/21)
13_1_20cm_4_scaffold_1_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19626..19934)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZN6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43420.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
helix-turn-helix domain-containing protein
13_1_20cm_4_scaffold_1_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19982..20215)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XV68_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43419.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_1_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21085..24498)
DNA (3414bp) protein (1138aa)
ligD; ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase D n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDV7_DELAC rbh
DNA ligase D {ECO:0000313|EMBL:EPD43422.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
13_1_20cm_4_scaffold_1_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24503..24685)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUE5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH09350.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
13_1_20cm_4_scaffold_1_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24712..25626)
DNA (915bp) protein (305aa)
Probable DNA repair protein HMPREF9702_02205 n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XV76_DELAC rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
ku protein
13_1_20cm_4_scaffold_1_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25808..26098
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZP4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43425.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
13_1_20cm_4_scaffold_1_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26205..26474)
DNA (270bp) protein (90aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVG5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43426.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
13_1_20cm_4_scaffold_1_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26903..27094)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDW4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43427.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_1_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27964..28467)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2WUF0_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43428.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
putative outer membrane protein
13_1_20cm_4_scaffold_1_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29278..31248)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XV82_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43429.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_1_27
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31544..32707)
DNA (1164bp) protein (388aa)
PREDICTED: zinc-type alcohol dehydrogenase-like protein C1198.01-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C162E7 rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACM31806.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
alcohol dehydrogenase groes domain-containing protein
13_1_20cm_4_scaffold_1_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34915..35523)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVH1_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43431.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
13_1_20cm_4_scaffold_1_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35901..36809)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDW9_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43432.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
transglutaminase domain-containing protein
13_1_20cm_4_scaffold_1_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37062..39458
DNA (2397bp) protein (799aa)
catalase (EC:1.11.1.6)
Catalase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUF3_DELAC rbh
Catalase {ECO:0000313|EMBL:EPD43433.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Displaying items 1-30 of 394 in total

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