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13_1_20cm_4_scaffold_1_19

Organism: 13_1_20CM_4_Delftia_acidovorans_67_18

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(21085..24498)

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 861.0
  • Bit_score: 1222
  • Evalue 0.0
DNA ligase D n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XDV7_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 999.99
  • Bit_score: 2295
  • Evalue 0.0
  • rbh
DNA ligase D {ECO:0000313|EMBL:EPD43422.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;" UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 2294
  • Evalue 0.0

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3414
GTGCGCGTCGCGACGTGGAACGTCAACAACGTCAACAAGCGTGTAGCGCTGTTGGTGGACTGGCTGCAACGCACCCAGCCCGATGTGGTCGCGCTGCAGGAAATCAAATGCCCGACGGCTGATTTTCCGACCGCCGCGCTGCAGGAGGCCGGGTACAGCAGCCTGGTGGTGGGGCAGCGCACCTGGAACGGCGTTGCCATACTGAGCCGCAATGCGGACCCTCTGCCCATCGTCACGGCGTTGCCTGGTGACTCGACAGACAAGGAGGCGCGCTACCTGGAGGCGGCCATCACGGGGATCTTGTTTGCCTGCCTGTATTTGCCCAACGGCAATCCCCAGCCGGGTCCCAAGTTCGACTACAAGCTTCGCTGGTTCGAGCGCCTACGGCGCCGTACCGAGGAGCTCTGGCATTCCGGGCACCCTGTGGTGCTGTTGGGGGACTGGAACGTTGTGCCCACGGACGCAGATATCTACAAACCCGATACTTGGCGCGATGACGCGCTGTTGCAGCCGGAGGCGCGTGCCGCCTTTGCCAGCATCCTGGCGCAAGGTTGGACGGATGCCATCGGCAAGGTCCATAGCAAGGTGCCCTTCACGTTCTGGGATTACCGGCGCAAGCGGTGGGAACGCGACGCCGGGCTGCGCATCGACCACATTCTCGTTGGACACTCGCTGAAGCTGCTGGACGCGGGAGTGGAACGCAAGGAGCGCGGCAAGGAGAGTCCGAGCGACCATGCCCCGGTGTGGGCGGAGCTCACTGTCGAGAAAGCACGAGCGGTGCGCAAACCGACCATAGCTGCCACGAAATCGCTTTCCACGAAGAAGGCCGAGAGGACGGCGAAAGCCAAACCCCCCTCCACTCCTGAACCGCTCGCACAGTACAAGGCCAAGCGCGATTTCACGAAGACTTCCGAACCCACCGGCGCAGCTGCGAAGCTGCCTCGTCGCGCAAAGGGCGCGGCGGATCCATTGCAGTTTGTGATCCAGAAACACTGGGCGTCCCGTCTGCACTACGACTTCCGGCTGGAGATGGACGGCGTCATGGTGAGCTGGGCGGTGCCAAAAGGTCCATCGTTCGACCCCAAGGTCAAGTCCATGGCCATTCATGTCGAGGACCACCCCACCGACTACAACACCTTCGAGGGGACCATTCCGAAAGGCGAGTACGGCGCCGGCAAGGTCATCATCTGGGACCGCGGAACGTGGGAGCCCATGGGCGATCCTCGCGACGGGCTGGCCAAGGGCAAAATCATGTTCCACCTCCACGGCCAAAAGCTTGCGGGTCTTTGGGAACTTGTGCGCATCTCGAAGCCTGGCGAGAAAAAGCAGGATCAGTGGATGCTGTTCAAGAAACGCGGCGACGCCTGGGCACGGCCGAGCACGGAGTACGACGTCATCGCCGCGCTGCCCGACAGCGTGGTCGAGACGCCGCTGGGACTCGCGGAGGAACGTGTGCCGGTCGTTGGCACGACGGGATCCGCACTTGGCGCCACATCTCAACCGCTGGCGAAGGCCAGAAAATCCCGCCTTCCTGCCAAGCTGGAGCCGCAACTCGCCACGCTGGTGTCGTCGGTCCCTGATGGCGACTGGATCATCGAGACCAAGTTCGACGGCTATCGCATTCTTGCGCGCGTGAAGGGAGACGAGGTTCGCCTCTATACGCGCAACGGTAATGACTGGACAGAGAAGCTGCAGCAGGTGGCCGATGGCATCGCCGAGCTTGGCCTGACGCGCGCTTGGCTTGATGGGGAGATCGTGGTGCTGAATGACGCCGGTATCCCGGATTTCAACCGCCTTCAGAACGCGATCGACAACGCTCGCACGCGGGACATCGTGATGTTCGTGTTCGATGTGCCCTACCTGGGCGATCAGGACCTTCGCAGCGTACCGCTGGTAGCGCGGCGGCAGCTGCTCCAGGAGCTCTTCGACAAACGCGAGAGCAGCACCGTCCGGTTCAGCCAGGCTTTCGAGGTCGCGCCCTCCCAGCTTTTGGGCGTCGCCTGCGACATGGGGCTGGAGGGCCTGATCATCAAGCGGGCGGATGCAACGTATGTATCCGGGAGGACCGACAGCTGGATGAAGCTCAAGTGCCAGCACAGGCAGGAGTTCGTGGTTCTGGGATTCACCGACCGCACTGGCGCTCCCAAAGAGGTCGGGAGTCTGCTGCTGGGTTATCACGAGGAGGGGAAGCTTGTGGCGGCCGGATCCGTAGGCACGGGATGGGGTTCCTCGACGGGGGCCGAACTGCATGCCCGATTGGTGAAGCTCGAAGTTCCGGACCCGCCACTGGACGCAGCCGAGTTCAAGCCGGGCCGGTGGTCCAAGCGCAAGGTCGGTGCCGAGCGGTGGGTCCGTCCCTCCCTGGTGGTGGAGGTGGCTTTTGGCGAATGGACCGCCGACAAACGCATTCGGCACGCGGTTTTCCGAGGTATCCGCACGGACAAGCCGGCGAAGATGATCGTCCGCGAGCGCGTGAAGAACCCAGCCGCCCCAGCGCTTGCCCCCGTTGCGCCAGAGTCCAAGGCAGCGCGGACGATCTCCAAGGTCAATATCACCCATCCCGACCGGGTGATTGACCCCACCACGGGATTGCGCAAGATTGATCTTGTGCGCTACTACGAGAGCGTTGCCGAGTGGATGCTGCCCCATCTCAAGGATCGCCCGGCATCGCTGGTCCGAGCGCCAACCGGGATTACGGGGCAGTTGTTTTTTCAGAAGCACCCAGAAAGCAAGATGCCCGGGCTCAAGGAGCTGGACCCCGCCCTGTGGCCCGGACACGAGGCGCTGTTGGCTGTGAACTCCGCCTACGCGCTGATTGCGGCAGCGCAGATGAACGTGGTTGAGTTCCACACGTGGAACTCCAAGGTCGCCCGCATCGACCAGCCGGACCGGTTCGTGCTCGACCTTGATCCTGGAGAGGGTGTCACCTGGCCGATGCTTCAGGAGGCCGCGCAGCTCACCCGCGTGATGCTCGCCGAGCTGGGGCTGGAGTGCTGGCTCAAGACCAGCGGTGGAAAGGGACTGCACGTAGTGGTGCCGATCACGCCCAAGCGCGACTACACCGAGGTGAAAGCGTTCTCGCAAGGCGTGGTGAAGCACATAGCGCGGGTGATCCCAAGCCGGTTCGTTTCTGTGATGGGCGGCAAAAACCGCGTCGGGAGAATCTTCATCGACTACCTTCGCAACGGTCATGGGCAGACCACCGCGTGCGCCTTCTCAGCGCGCTCGCGGCCTGGGATGGGGGTTTCGATGCCGGTGGGTTGGGAGCAGCTCAAGGAGCTCAAGGGCGGCGCGCAGTGGACGGTTGCGACGGCGCGGGAGTATTTGAGTTTTCAGCAGGAAGATCCCTGGAGGGAATTCTGGAAGAAGCGGCAGTCAGTCGACAGTGCCATAAAAATACTCGCTGAAACATAG
PROTEIN sequence
Length: 1138
VRVATWNVNNVNKRVALLVDWLQRTQPDVVALQEIKCPTADFPTAALQEAGYSSLVVGQRTWNGVAILSRNADPLPIVTALPGDSTDKEARYLEAAITGILFACLYLPNGNPQPGPKFDYKLRWFERLRRRTEELWHSGHPVVLLGDWNVVPTDADIYKPDTWRDDALLQPEARAAFASILAQGWTDAIGKVHSKVPFTFWDYRRKRWERDAGLRIDHILVGHSLKLLDAGVERKERGKESPSDHAPVWAELTVEKARAVRKPTIAATKSLSTKKAERTAKAKPPSTPEPLAQYKAKRDFTKTSEPTGAAAKLPRRAKGAADPLQFVIQKHWASRLHYDFRLEMDGVMVSWAVPKGPSFDPKVKSMAIHVEDHPTDYNTFEGTIPKGEYGAGKVIIWDRGTWEPMGDPRDGLAKGKIMFHLHGQKLAGLWELVRISKPGEKKQDQWMLFKKRGDAWARPSTEYDVIAALPDSVVETPLGLAEERVPVVGTTGSALGATSQPLAKARKSRLPAKLEPQLATLVSSVPDGDWIIETKFDGYRILARVKGDEVRLYTRNGNDWTEKLQQVADGIAELGLTRAWLDGEIVVLNDAGIPDFNRLQNAIDNARTRDIVMFVFDVPYLGDQDLRSVPLVARRQLLQELFDKRESSTVRFSQAFEVAPSQLLGVACDMGLEGLIIKRADATYVSGRTDSWMKLKCQHRQEFVVLGFTDRTGAPKEVGSLLLGYHEEGKLVAAGSVGTGWGSSTGAELHARLVKLEVPDPPLDAAEFKPGRWSKRKVGAERWVRPSLVVEVAFGEWTADKRIRHAVFRGIRTDKPAKMIVRERVKNPAAPALAPVAPESKAARTISKVNITHPDRVIDPTTGLRKIDLVRYYESVAEWMLPHLKDRPASLVRAPTGITGQLFFQKHPESKMPGLKELDPALWPGHEALLAVNSAYALIAAAQMNVVEFHTWNSKVARIDQPDRFVLDLDPGEGVTWPMLQEAAQLTRVMLAELGLECWLKTSGGKGLHVVVPITPKRDYTEVKAFSQGVVKHIARVIPSRFVSVMGGKNRVGRIFIDYLRNGHGQTTACAFSARSRPGMGVSMPVGWEQLKELKGGAQWTVATAREYLSFQQEDPWREFWKKRQSVDSAIKILAET*