ggKbase home page
Advanced Search
Search Help

13_1_20cm_4_scaffold_38_20

Organism: 13_1_20CM_4_Delftia_acidovorans_67_18

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(30861..35090)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2745
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=RPOC_DELAS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2745
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2745
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4230
ATGAAATCTCTACTCGACCTGTTCAAGCAATTCACGCCTGATGAGCATTTCGATGCCATCAAGATCGGTCTGGCTTCTCCCGAGAAGATCCGTTCCTGGTCCTTCGGCGAGGTGAAGAAGCCCGAGACCATCAACTACCGCACGTTCAAGCCCGAGCGCGATGGTCTGTTCTGCGCCAAGATCTTTGGCCCCATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGTGTGATCTGCGAGAAGTGCGGCGTCGAAGTGACCCAGACCAAGGTGCGCCGCGAGCGCATGGGCCACATCGACCTGGCTGCGCCCTGCGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGTCTGGGCCTGGTGCTCGACATGACGCTGCGCGATATCGAGCGCGTGCTGTACTTCGAAGCCTACGTGGTGACCGACCCCGGCATGACCCCGCTGAAGAAGTTCAGCATCATGACCGAGGACGATTACGAGGCCAAGCGCACCGAATACGGTGACGAGTTCGAAGCCAAGATGGGCGCCGAAGGCATCAAGGATCTGCTCGAAGGCATCGACATCGATGTCGAGACAGAGCGCCTGCGCGGCGATCTGACCGGCTCCGAAGTCAAGGTCAAGAAGAACGCCAAGCGCCTGAAGCTGCTGGAAGCGTTCAAGAAGTCCGGCATCAAGCCGGGCTGGATGGTCATGGAAGTGCTGCCCGTGCTGCCCCCGGACCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTCGCAACGTCCGACCTGAACGACCTGTATCGCCGCGTCATCAACCGCAACTCGCGTCTGCGCCGCCTGCTGGAGCTGAAGGCTCCGGAAATCATCGCGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTGGACTCGCTGCTGGACAACGGCCGCCGTGGCAAGGCCATGACGGGCGCCAACAAGCGTGCCCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGAGCGGTCGTTTCCGCCAGAACTTGCTGGGCAAGCGCGTGGACTATTCGGGCCGTTCCGTGATCACGGTGGGTCCGTACCTCAAGCTGCACCAGTGCGGTCTGCCCAAGCTGATGGCGCTGGAACTGTTCAAGCCCTTCATCTTCGCGCAGCTCGAGCAGCGCGGCATCGCCACCACCATCAAGGCGGCGAAGAAGGAAGTCGAATCCGGCACGCCCGTGGTGTGGGACATCCTCGAAGAGGTCATCAAGGAGCACCCGGTCATGCTGAACCGTGCTCCCACGCTGCACCGACTGGGCATCCAGGCCTTCGAGCCCATCCTGATCGAAGGCAAGGCCATCCAGCTGCACCCGCTCGTCTGCGCGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCTGTCCACGTTCCGCTGTCGGTGGAAGCACAGATGGAAGCCCGCACGCTGATGCTGGCCTCCAACAACGTGCTGTTCCCCGCATCGGGCGAGCCCTCCATCGTTCCTTCGCAGGACGTGGTGCTGGGTCTGTACCACGCAACGCGCGAGCGCATCAACGGCAAGGGCGAAGGCATGATCTTCGCCGACATCGGTGAAGTGCAGCGCGCGCTGGACTCCGACCAGGTCGAACTGGCCGCCAAGATCAGCGTGCGTCTGACCGAGTGGACCAAGAACAAGGACTCCGGCGAGTTCGAGCCTTCGACCAGCCTGGTGGAAACCACCGTGGGCCGCGCCCTGATGTCCGAGATCCTTCCCAAGGGCCTGCCGTTCAGCCACATGAACAAGGCGCTCAAGAAGAAGGAAATCTCCAAGCTCATCAACGCCTCGTTCCGCAAGTGCGGTCTCAAGGCCACGGTGGTGTTTGCCGACAAGCTGCTGCAAAACGGCTTCCGCCTGTCCACACACGCCGGTATCTCGATCGCCATCGGCGACATGCTGGTGCCGCCGCAAAAGGCCGAGATCATCGGCCGTGCCGAAGCCGAGGTGAAGGAGATCGAACAGCAGTACGTCTCCGGTCTCGTGACCGCTGGCGAGCGCTACAACAAGGTGGTGGACATCTGGGGCAAGGCCGGCGACGAAGTCTCCAAGGTCATGATGGCCCAGCTTGCCAAGGAAAAGGTCATCGACCGCCACGGCAACGAAGTCGAGCAGGAATCGTTCAACGCCATTTACATGATGGCCGACTCCGGTGCCCGCGGCTCGGCCGCGCAGATCCGCCAGCTGGCCGGCATGCGTGGCCTGATGGCCAAGCCTGACGGCTCCATCATCGAGACGCCCATTACGGCGAACTTCCGTGAAGGCCTGAACGTTCTGCAGTACTTCATCTCCACCCACGGCGCCCGAAAGGGTCTGGCCGACACGGCGTTGAAGACGGCCAACTCCGGCTACCTGACGCGTCGTCTGGTGGACGTGACGCAGGATCTGGTGGTCAACGAAGACGATTGCGGCACGACCAATGGCGCACTGATGCGCGCCATCGTCGAAGGCGGTGAAGTGATCGAATCGCTGCGCGACCGCGTGCTGGGCCGTACCACGGCCGAGGATGTCGTGCATCCCGAGACGCTGGCCGTCCTGCTGCCCGCAGGCACGCTGCTCAACGAAGACGGGATCGATGAACTCGAGTTGCAGGGCGTGGACGAGATCAAGGTCCGCACCGCGCTGACCTGCGAAACCCGCTACGGCCTGTGCGCCAAGTGCTACGGCCGCGACCTGGGCCGCGGCGGCCTGATCAACCTCGGCGAAGCCGTGGGTGTGATCGCCGCCCAGTCCATCGGCGAGCCCGGCACGCAGCTGACCATGCGTACCTTCCACATCGGTGGTGCCGCTTCGCGCGCTGCCATCGCCTCGAGCGTGGAAGCCAAGTCCAACGGCTCCATCAGCTTCAACAGCACGATGCGCTACGTCAGCAACACCAAGGGTGAGCTGGTCGTGATTTCGCGTTCGGGCGAAATCGTCATCAGCGACAACGGCCGCGAGCGTGAGCGCCACAAGGTGCCTTACGGTGCCGTGCTGACCGTCAGGCCTGACCAGCAGGTCAAGGCCGGTCTGATCCTGGCCAACTGGGATCCGCTGACCCGACCCATCATTACCGAGTACGCCGGCCAGGTGCGCTTCGAGAATGTGGAAGAGGGCCTGACCGTGGCCAAGCAGGTCGATGAAGTGACCGGCCTGTCCACGCTGGTGGTGATCGATCCCAAGCGCCGTGGCTCTGCCAAGGTCGTGCGTCCTCAGGTCAAGCTGATCGATGCCAACAACCAGGAAGTCAAGATCCCTGGCACCGACCACTCGGTGACGATCGGCTTCCAGGTCGGCGCTCTGATCCAGGTGCGCGACGGCCAGGACGTGGGCCCCGGCGAAGTGCTGGCCCGTATCCCTGTCGAAGGCCAGAAGACCCGCGACATTACCGGCGGTCTGCCCCGCGTGGCCGAGCTGTTCGAAGCCCGTACGCCCAAGGACAAGGGCACGCTGGCCGAGATGACCGGCACCATCTCCTTCGGCAAGGAAACCAAGGGCAAGGTGCGCATGCAGATCACCGATCTGGATGGCAAGGTCTGGGAAGAACTCGTGCCCAAGGAAAAGAACATCCTGGTGCACGAAGGCCAGGTGGTCAACAAGGGCGAGTCCATCGTCGACGGTCCCGCCGATCCGCAGGACATCCTGCGCCTGCTGGGCATCGAGGAGCTGTCGCGCTACATCGTTGATGAAGTGCAGGACGTCTACCGTCTGCAGGGTGTGAAGATCAATGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCGCCGCGTCGTGGTCGAGAACACCGGCGATTCGACCTACATCGCTGGCGAGCAGGTCGAGCGTTCGGAAATCCTCAATACCAACGAGGCCCTGCAGCGCGAAGGCAAGATCCCTGCCACGTACTCCAACGTGCTGCTGGGTATTACCAAGGCTTCGCTGTCGACCGACTCCTTCATCTCCGCCGCGTCGTTCCAGGAAACGACCCGCGTGCTCACCGAGGCTGCCATCATGGGCAAGCGCGACGAGCTGCGTGGCCTGAAGGAAAACGTCATCGTCGGTCGCCTGATCCCCGCCGGTACGGGTCTGGCCTACCACCAGGCACGCAAGGCCAAGGACGCCATGGACGACGCAGAGCGCCGCGCCATCGCCGACGCCGAAGCGGCCGAACTGGCCGGTGTGATGGCCGATGACGACACTGCTGCAGTGTCTGTCGCCGGTGACGCTTCCGCCGACTGA
PROTEIN sequence
Length: 1410
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMTEDDYEAKRTEYGDEFEAKMGAEGIKDLLEGIDIDVETERLRGDLTGSEVKVKKNAKRLKLLEAFKKSGIKPGWMVMEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPYLKLHQCGLPKLMALELFKPFIFAQLEQRGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATRERINGKGEGMIFADIGEVQRALDSDQVELAAKISVRLTEWTKNKDSGEFEPSTSLVETTVGRALMSEILPKGLPFSHMNKALKKKEISKLINASFRKCGLKATVVFADKLLQNGFRLSTHAGISIAIGDMLVPPQKAEIIGRAEAEVKEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMAQLAKEKVIDRHGNEVEQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVNEDDCGTTNGALMRAIVEGGEVIESLRDRVLGRTTAEDVVHPETLAVLLPAGTLLNEDGIDELELQGVDEIKVRTALTCETRYGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGSISFNSTMRYVSNTKGELVVISRSGEIVISDNGRERERHKVPYGAVLTVRPDQQVKAGLILANWDPLTRPIITEYAGQVRFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPQVKLIDANNQEVKIPGTDHSVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARTPKDKGTLAEMTGTISFGKETKGKVRMQITDLDGKVWEELVPKEKNILVHEGQVVNKGESIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENTGDSTYIAGEQVERSEILNTNEALQREGKIPATYSNVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDAMDDAERRAIADAEAAELAGVMADDDTAAVSVAGDASAD*