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13_1_40cm_scaffold_1337

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1337_1
unknown

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3..203
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_1337_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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775..1173
DNA (399bp) protein (133aa)
Putative oxidoreductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RBG_16_Ignavibacteria_34_14_curated
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
13_1_40cm_scaffold_1337_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1925..2464
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z8H2_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_scaffold_1337_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2468..3442
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RZ05_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_scaffold_1337_5
RBG_16_Archaea_50_20_curated, Archaea

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3439..4017
DNA (579bp) protein (193aa)
RNA-binding protein, containing S1 domain n=2 Tax=Methanosarcina mazei RepID=M1QJY3_METMZ
RNA binding protein; K07573 exosome complex component CSL4 Tax=RBG_16_Archaea_50_20_curated
RNA-binding protein, containing S1 domain
13_1_40cm_scaffold_1337_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4014..4301
DNA (288bp) protein (96aa)
DNA-directed RNA polymerase subunit L n=2 Tax=Pyrococcus furiosus RepID=RPOL_PYRFU
DNA-directed RNA polymerase subunit L Tax=RBG_13_Bathyarchaeota_46_16b_curated
DNA-directed RNA polymerase subunit L
13_1_40cm_scaffold_1337_7
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4456..4998
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Prevotella nanceiensis RepID=UPI00036099CA
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:ACV22503.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source
13_1_40cm_scaffold_1337_8
RBG_16_Archaea_50_20_curated, Archaea

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5030..5410
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YTH9_THEON
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_1337_9
unknown

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5407..5886
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_40cm_scaffold_1337_10
RBG_16_Archaea_50_20_curated, Archaea

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5994..6254
DNA (261bp) protein (87aa)
DNA-directed RNA polymerase subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPL5_THELI
DNA-directed RNA polymerase subunit M Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase subunit M
13_1_40cm_scaffold_1337_11
RBG_16_Archaea_50_20_curated, Archaea

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6320..7075
DNA (756bp) protein (252aa)
DNA polymerase sliding clamp n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MUU8_PYRCJ
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen Tax=RBG_16_Archaea_50_20_curated
pcn; proliferating cell nuclear antigen
13_1_40cm_scaffold_1337_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7082..8134
DNA (1053bp) protein (351aa)
priB; DNA primase, large subunit; K02685 DNA primase large subunit [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase large subunit PriL n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z119_METPS
priB; DNA primase large subunit
13_1_40cm_scaffold_1337_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

8121..9335
DNA (1215bp) protein (405aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7C9_9ARCH
13_1_40cm_scaffold_1337_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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9401..9964
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP35_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_scaffold_1337_15
RBG_16_Archaea_50_20_curated, Archaea

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10790..11212
DNA (423bp) protein (141aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=IF2A_METKA
translation initiation factor 2, subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=RBG_16_Archaea_50_20_curated
SUI2; translation initiation factor IF-2 subunit alpha
13_1_40cm_scaffold_1337_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(11378..12637)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5Y4_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_scaffold_1337_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(12621..13079)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1G9P1_HELRO
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
stt3; oligosaccharyl transferase
13_1_40cm_scaffold_1337_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(13148..13840)
DNA (693bp) protein (231aa)
dolichyl-diphosphooligosaccharide--protein glycotransferase (EC:2.4.1.119) Tax=RBG_16_Bathyarchaeota_48_13_curated
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5Y4_9ARCH
hypothetical protein
13_1_40cm_scaffold_1337_19
unknown

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comp(14243..14557)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_scaffold_1337_trna_1
unknown

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comp(14656..14763)
DNA (108bp)
transferRNA
13_1_40cm_scaffold_1337_20
unknown

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14960..15100
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_scaffold_1337_21
unknown

Not on your lists

15097..15408
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_scaffold_1337_22
unknown

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15452..15679
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_1337_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15951..16946)
DNA (996bp) protein (332aa)
Phosphate update regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGG8_NITGG
phosphate uptake regulator
Phosphate uptake regulator {ECO:0000313|EMBL:AIF82125.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus N
13_1_40cm_scaffold_1337_24
unknown

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17061..17324
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_scaffold_1337_25
unknown

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17445..17639
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 26 items

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