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13_1_40cm_scaffold_1351

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1351_1
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=RBG_16_Caldithrix_48_16_curated
13_1_40cm_scaffold_1351_2
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(210..1463)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
hypothetical protein
13_1_40cm_scaffold_1351_3
unknown

Not on your lists

comp(1536..1838)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_scaffold_1351_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1891..3183)
DNA (1293bp) protein (431aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4166554 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative surface layer protein
13_1_40cm_scaffold_1351_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3207..3581)
DNA (375bp) protein (125aa)
Electron transport protein SCO1/SenC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Electron transport protein SCO1/SenC id=4166553 bin=GWA2_Methylomirabilis_73_35 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1351_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3581..5605)
DNA (2025bp) protein (675aa)
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c, class I id=4166552 bin=GWA2_Methylomirabilis_73_35 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c, class I
13_1_40cm_scaffold_1351_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5608..6327
DNA (720bp) protein (240aa)
Haloacid dehalogenase-like hydrolase domain-containing protein 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3 id=3960137 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Haloacid dehalogenase-like hydrolase domain-containing protein 3
13_1_40cm_scaffold_1351_8
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(6328..7026)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003615A8D
Methyltransferase-UbiE family
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_scaffold_1351_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7158..8528)
DNA (1371bp) protein (457aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14626970 bin=bin7_NC10_sister species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
phosphomannomutase (EC:5.4.2.8)
13_1_40cm_scaffold_1351_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8606..8941
DNA (336bp) protein (112aa)
4-carboxymuconolactone decarboxylase (EC:4.1.1.44) Tax=GWA2_Rokubacteria_73_35_curated
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Predicted 4-carboxymuconolactone decarboxylase id=3960144 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1351_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8938..9696
DNA (759bp) protein (253aa)
histidinol-phosphate phosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol-phosphate phosphatase, putative id=3960146 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidinol-phosphate phosphatase
13_1_40cm_scaffold_1351_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9720..10637
DNA (918bp) protein (306aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Glycosyl transferase, family 9 id=3960148 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1351_13
unknown

Not on your lists

comp(10648..10797)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_scaffold_1351_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10990..12057)
DNA (1068bp) protein (356aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hydrolase, carbon-nitrogen family id=3229907 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
13_1_40cm_scaffold_1351_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12102..13355)
DNA (1254bp) protein (418aa)
id=14627806 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_1351_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13474..14547
DNA (1074bp) protein (358aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_73_35_curated
Uroporphyrinogen decarboxylase (URO-D) id=2312843 bin=GWA2_Methylomirabilis_73_35 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
13_1_40cm_scaffold_1351_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14685..15422)
DNA (738bp) protein (246aa)
cyaCe; adenylate cyclase (EC:4.6.1.1)
adenylate cyclase n=1 Tax=Rhizobium leguminosarum RepID=UPI000369CF9C
Uncharacterized protein {ECO:0000313|EMBL:ETW92716.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
13_1_40cm_scaffold_1351_18
unknown

Not on your lists

15641..15955
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_scaffold_1351_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16316..17695)
DNA (1380bp) protein (460aa)
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Tryptophan synthase beta chain id=3960243 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxal-phosphate dependent TrpB-like enzyme
13_1_40cm_scaffold_1351_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17820..18986
DNA (1167bp) protein (389aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3960244 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1351_21
unknown

Not on your lists

comp(19018..19242)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_scaffold_1351_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19464..20000)
DNA (537bp) protein (179aa)
YCII-related id=3914668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
YciI-like protein; K09780 hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_1351_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

20069..22717
DNA (2649bp) protein (883aa)
helicase Tax=GWC2_Rokubacteria_70_16_curated
Putative helicase id=3914659 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
helicase
13_1_40cm_scaffold_1351_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22714..23202
DNA (489bp) protein (163aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3269477 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1351_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

23215..23523
DNA (309bp) protein (103aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=3269471 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1351_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23648..24214
DNA (567bp) protein (189aa)
Methylase id=3269468 bin=GWA2_Methylomirabilis_73_35 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase
13_1_40cm_scaffold_1351_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24222..24965
DNA (744bp) protein (248aa)
YdjC-like protein; K03478 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
YdjC-like protein id=3269465 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1351_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24999..25988
DNA (990bp) protein (330aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transcriptional repressor; K00845 glucokinase [EC:2.7.1.2] id=14627250 bin=bin7_NC10_sister species=Shinella zoogloeoides genus=Shinella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
NagC; transcriptional regulator/sugar kinase
13_1_40cm_scaffold_1351_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

25985..26179
DNA (195bp) protein (65aa)
alcohol dehydrogenase GroES domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alcohol dehydrogenase GroES domain protein id=3824564 bin=GWC2_Methylomirabilis_70_16 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alcohol dehydrogenase GroES domain-containing protein
13_1_40cm_scaffold_1351_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26181..26594)
DNA (414bp) protein (138aa)
Thiol-disulfide oxidoreductase ResA id=3824679 bin=GWC2_Methylomirabilis_70_16 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Thiol-disulfide isomerase and thioredoxins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying items 1-30 of 43 in total

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