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13_1_40cm_scaffold_13639

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_13639_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
putative carbon monoxide dehydrogenase large chain (EC:1.2.99.2) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tmr:Tmar_1478 xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) id=1245294 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative carbon monoxide dehydrogenase large chain (EC:1.2.99.2)
13_1_40cm_scaffold_13639_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(404..877)
DNA (474bp) protein (158aa)
aldehyde oxidase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RBG_16_Chloroflexi_63_12_curated
(2Fe-2S)-binding domain-containing protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGE0_THEM7
(2Fe-2S)-binding domain-containing protein
13_1_40cm_scaffold_13639_3

Not on your lists

966..2102
DNA (1137bp) protein (379aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
Putative xanthine dehydrogenase {ECO:0000313|EMBL:ADC35806.1}; TaxID=698391 species="Bacteria; environmental samples.;" source="uncultured bacterium 66.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_scaffold_13639_4
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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2099..3148
DNA (1050bp) protein (350aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_scaffold_13639_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3278..3529
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI000361DC6B
Aldehyde dehydrogenase small subunit/carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:GAN78272.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Ac
carbon-monoxide dehydrogenase (acceptor)
13_1_40cm_scaffold_13639_6
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3526..4359
DNA (834bp) protein (278aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT7_HALO1
FAD-binding molybdopterin dehydrogenase protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ACY18444.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangi
13_1_40cm_scaffold_13639_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4356..5690
DNA (1335bp) protein (445aa)
Pyruvate/Phosphoenolpyruvate kinase domain protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NX3_STIAD
pyruvate/phosphoenolpyruvate kinase domain-containing protein
Pyruvate/Phosphoenolpyruvate kinase domain protein {ECO:0000313|EMBL:ADO68832.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU62178.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobact
13_1_40cm_scaffold_13639_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5687..5989)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_13639_9
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6082..7224)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9YCC4_AZOVI
Putative purine degradation protein {ECO:0000313|EMBL:KIG18861.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
13_1_40cm_scaffold_13639_10
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7214..7528)
DNA (315bp) protein (105aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QX81_9DELT
hydroxyisourate hydrolase
13_1_40cm_scaffold_13639_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7525..8016)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QJ21_9DELT
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sand
putative OHCU decarboxylase
13_1_40cm_scaffold_13639_12
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8013..8963)
DNA (951bp) protein (317aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxID=1297742 species="Bacteria;
Probable allantoicase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U4Y4_9DELT
allantoicase
13_1_40cm_scaffold_13639_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8948..10297)
DNA (1350bp) protein (450aa)
allantoinase; K01466 allantoinase [EC:3.5.2.5] Tax=RBG_16_RIF_WS3X_71_46_curated
Allantoicase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHT4_SORCE
allantoicase
13_1_40cm_scaffold_13639_14
unknown

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10381..10587
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_13639_15
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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10612..11019
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AE62_COLFT
transmembrane_regions 17..39 Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_40cm_scaffold_13639_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11106..11414
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADK3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_13639_17
unknown

Not on your lists

comp(11659..11898)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_13639_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12138..13529
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_13639_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(13533..15071)
DNA (1539bp) protein (513aa)
Response regulator receiver id=3068376 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
histidine kinase
13_1_40cm_scaffold_13639_20
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(15087..15509)
DNA (423bp) protein (141aa)
sensory transduction regulatory protein Tax=RBG_13_Nitrospirae_43_8_curated
response regulator receiver protein id=14426277 bin=bin1_lowGC species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver protein
13_1_40cm_scaffold_13639_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15506..16045)
DNA (540bp) protein (180aa)
Putative Histidine kinase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI33_9CHLR
multi-sensor signal transduction histidine kinase Tax=RBG_16_Desulfobacca_60_12_curated
histidine kinase
13_1_40cm_scaffold_13639_22
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16068..16808)
DNA (741bp) protein (247aa)
Putative PAS/PAC sensor protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBK7_NITWC
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ADJ29654.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus
Displaying 22 items

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