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13_1_40cm_scaffold_141

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_141_1
unknown

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comp(142..717)
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_scaffold_141_2
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(806..1399)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C906D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI46297.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain
13_1_40cm_scaffold_141_3
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1500..1892
DNA (393bp) protein (131aa)
Lactoylglutathione lyase family protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MAS2_ARTPP
lactoylglutathione lyase family protein
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:ADX74005.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthreniv
13_1_40cm_scaffold_141_4
R_NC10_66_22, NC10, Bacteria

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comp(2004..3017)
DNA (1014bp) protein (338aa)
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Phosphate/sulphate permease id=3122079 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pit; low-affinity phosphate transporter
13_1_40cm_scaffold_141_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3031..3657)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUC2_METMJ
hypothetical protein; K07220 hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
13_1_40cm_scaffold_141_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(3762..4817)
DNA (1056bp) protein (352aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1) Tax=RBG_16_Thaumarchaeota_49_8_curated
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARR5_9ARCH
13_1_40cm_scaffold_141_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(4820..5671)
DNA (852bp) protein (284aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_16_Thaumarchaeota_49_8_curated
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003826EBE
13_1_40cm_scaffold_141_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(5673..6107)
DNA (435bp) protein (145aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RBG_16_Thaumarchaeota_49_8_curated
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBP4_9EURY
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_40cm_scaffold_141_9
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6104..6700)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoana
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVK5_ACEAZ
5-formyltetrahydrofolate cyclo-ligase
13_1_40cm_scaffold_141_10
unknown

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comp(6755..7654)
DNA (900bp) protein (300aa)

This feature has no annotations

13_1_40cm_scaffold_141_11
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(7668..8525)
DNA (858bp) protein (286aa)
Bifunctional protein FolD n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=FOLD_SYMTH
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
13_1_40cm_scaffold_141_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8522..9145)
DNA (624bp) protein (208aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:AFU57385.1}; EC=2.1.2.2 {ECO:0000313|EMBL:AFU57385.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales
Phosphoribosylglycinamide formyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM7_NITGG
13_1_40cm_scaffold_141_13
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(9148..9909)
DNA (762bp) protein (254aa)
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
13_1_40cm_scaffold_141_14
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(10000..10416)
DNA (417bp) protein (139aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein; K02503 Hit-like protein involved in cell-cycle regulation id=5102008 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
histidine triad (HIT) protein
13_1_40cm_scaffold_141_15
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10423..11712)
DNA (1290bp) protein (430aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVG6_KYRT2
13_1_40cm_scaffold_141_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(11736..13277)
DNA (1542bp) protein (514aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
class II glutamine amidotransferase Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_scaffold_141_17
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(13442..15658)
DNA (2217bp) protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
13_1_40cm_scaffold_141_18
unknown

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comp(15655..15861)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_141_19
unknown

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comp(15861..16052)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_scaffold_141_20
unknown

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comp(16049..16303)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_scaffold_141_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(16305..17018)
DNA (714bp) protein (238aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured archaeon W5-61a RepID=H9BX94_9ARCH
13_1_40cm_scaffold_141_22
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17026..17289)
DNA (264bp) protein (88aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Putative phosphoribosylformylglycinamidine synthase PurS n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
purS; putative phosphoribosylformylglycinamidine synthase PurS
13_1_40cm_scaffold_141_23
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(17362..18315)
DNA (954bp) protein (318aa)
Putative DNA methylase id=3924656 bin=GWF2_Ignavibacteria_35_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative DNA methylase Tax=RBG_16_Ignavibacteria_35_7_curated
hypothetical protein
13_1_40cm_scaffold_141_24
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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18351..19106
DNA (756bp) protein (252aa)
KNTase domain protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HP66_9BACL
KNTase domain protein {ECO:0000313|EMBL:EHB48903.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
aminoglycoside nucleotidyltransferase
13_1_40cm_scaffold_141_25
unknown

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19248..20759
DNA (1512bp) protein (504aa)

This feature has no annotations

13_1_40cm_scaffold_141_26
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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20892..21704
DNA (813bp) protein (271aa)
putative 3-demethylubiquinol 3-O-methyltransferase (EC:2.1.1.64)
Methyltransferase type 11 id=2115474 bin=GWB2_Geobacter-like_52_12 species=Anoxybacillus sp. DT3-1 genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
type 11 methyltransferase Tax=GWB2_Geobacteraceae_52_12_curated
13_1_40cm_scaffold_141_27
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21841..22224
DNA (384bp) protein (128aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PQH5_KRIFD
PPOX class probable F420-dependent enzyme, MSMEG_5819 family
PPOX class probable F420-dependent enzyme, MSMEG_5819 family {ECO:0000313|EMBL:AIF84335.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitr
Displaying 27 items

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