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13_1_40cm_scaffold_1532

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1532_1
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..363
DNA (363bp) protein (121aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373D8E3
Enoyl-CoA hydratase {ECO:0000313|EMBL:ESZ54102.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L10
13_1_40cm_scaffold_1532_2
unknown

Not on your lists

375..650
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_scaffold_1532_trna_1
unknown

Not on your lists

comp(1026..1088)
DNA (63bp)
transferRNA
13_1_40cm_scaffold_1532_3
unknown

Not on your lists

1468..1929
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_scaffold_1532_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1972..3357
DNA (1386bp) protein (462aa)
helicase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA repair protein Rad25 id=5012886 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
type III restriction protein res subunit
13_1_40cm_scaffold_1532_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3329..4534
DNA (1206bp) protein (402aa)
Putative uncharacterized protein id=5012884 bin=GWA2_Elusimicrobia_69_24 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein; K09744 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_1532_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4626..4772)
DNA (147bp) protein (49aa)
Oxidoreductase {ECO:0000313|EMBL:AJQ48493.1}; TaxID=1384061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S13.1.2
13_1_40cm_scaffold_1532_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4780..5637)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003749985
Variovorax paradoxus strain MEDvA23 contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23375.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
nmra family protein
13_1_40cm_scaffold_1532_8
unknown

Not on your lists

comp(5705..5800)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_scaffold_1532_9
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5755..6171)
DNA (417bp) protein (139aa)
Polyketide cyclase/dehydrase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NUC7_GRAMM
Uncharacterized protein {ECO:0000313|EMBL:KDP85221.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
polyketide cyclase/dehydrase
13_1_40cm_scaffold_1532_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6168..6818)
DNA (651bp) protein (217aa)
Dihydrodipicolinate synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JEI3_OLICO
dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AEI07079.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carb
13_1_40cm_scaffold_1532_11
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6830..7351)
DNA (522bp) protein (174aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5Z5_ACISM
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:ADW70879.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
13_1_40cm_scaffold_1532_12
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7812..8975
DNA (1164bp) protein (388aa)
xanthine dehydrogenase (EC:1.17.1.4)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002DFD81D
Xanthine dehydrogenase {ECO:0000313|EMBL:KIE10109.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
13_1_40cm_scaffold_1532_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9025..11268
DNA (2244bp) protein (748aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H973_ANADF
sigma-54 dependent trancsriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS25269.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobac
13_1_40cm_scaffold_1532_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11378..11644
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H972_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25268.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_1532_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11663..12139
DNA (477bp) protein (159aa)
(2Fe-2S)-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B72C6A
Uncharacterized protein {ECO:0000313|EMBL:KGF83317.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;
carbon monoxide dehydrogenase small subunit CoxS/CutS-like protein
13_1_40cm_scaffold_1532_16
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12142..14298
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEF8_9BRAD
tat (twin-arginine translocation) pathway signal sequence domain protein
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:CDG82136.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacte
13_1_40cm_scaffold_1532_17
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14310..14867
DNA (558bp) protein (186aa)
Lipoprotein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G8J7_9BURK
Lipoprotein {ECO:0000313|EMBL:EOA05052.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense G
cytochrome c-type protein
13_1_40cm_scaffold_1532_18
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15175..15570
DNA (396bp) protein (132aa)
Alcohol dehydrogenase n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N6W3_9PSED
Alcohol dehydrogenase {ECO:0000313|EMBL:EIK97203.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47
alcohol dehydrogenase
13_1_40cm_scaffold_1532_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15778..15981
DNA (204bp) protein (68aa)
Oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9B2_SORC5
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:CAN99153.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum
13_1_40cm_scaffold_1532_20
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

16632..17105
DNA (474bp) protein (158aa)
TolB-like beta propeller protein id=2953113 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
TolB-like beta propeller protein Tax=GWB1_Bdellovibrionales_55_8_curated
WD40-like beta propeller protein
13_1_40cm_scaffold_1532_21
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

17829..18524
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037A0BDB
integrase catalytic subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
integrase catalytic subunit
13_1_40cm_scaffold_1532_22
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18651..18839
DNA (189bp) protein (63aa)
Putative 2Fe-2S ferredoxin {ECO:0000313|EMBL:GAF48636.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 1006
13_1_40cm_scaffold_1532_23
unknown

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comp(18955..19122)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_1532_24
Pseudomonas sp. GM67, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19119..21827)
DNA (2709bp) protein (903aa)
Cbb3-type cytochrome oxidase, subunit 1 n=1 Tax=Pseudomonas sp. GM67 RepID=J3H4T1_9PSED
Cbb3-type cytochrome oxidase, subunit 1 {ECO:0000313|EMBL:EJM84462.1}; TaxID=1144335 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
putative cytochrome C subunit protein
13_1_40cm_scaffold_1532_25
unknown

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comp(21824..22330)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_scaffold_1532_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22320..22748)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K889_PSEFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAY48139.1}; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluore
13_1_40cm_scaffold_1532_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22755..23915)
DNA (1161bp) protein (387aa)
Putative cytochrome C dehydrogenase-related protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K890_PSEFS
putative cytochrome C dehydrogenase-like protein
Putative cytochrome C dehydrogenase-related protein {ECO:0000313|EMBL:CAY48140.1}; Flags: Precursor;; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonada
13_1_40cm_scaffold_1532_28
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24263..24433)
DNA (171bp) protein (57aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" sour
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036C59C9
multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_1532_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24501..24833
DNA (333bp) protein (111aa)
Putative transposase id=2589592 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium 16A2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transposase of IS1354, IS256 family Tax=GWC2_Rokubacteria_70_16_curated
transposase mutator type
Displaying items 1-30 of 32 in total

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