name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_scaffold_1578_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
2..1207
|
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ctaD; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase, subunit I id=4464470 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_1578_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
1204..1521
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=4464469 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome C oxidase subunit IV
|
|
13_1_40cm_scaffold_1578_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
1521..2336
|
ctaG; putative CtaG protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative CtaG protein id=4464468 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
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|
13_1_40cm_scaffold_1578_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
2347..3657
|
nucleotide sugar dehydrogenase (EC:1.1.1.22) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase id=4648607 bin=GWF2_Methylomirabilis_70_14 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
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13_1_40cm_scaffold_1578_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
3666..4601
|
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UDP-glucuronate decarboxylase (EC:4.1.1.35)
NAD-dependent epimerase/dehydratase id=2287859 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_1578_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
4598..5527
|
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWA2_Rokubacteria_73_35_curated
NAD-dependent epimerase/dehydratase id=2287861 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase
|
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13_1_40cm_scaffold_1578_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
5524..5694
|
hypothetical protein; K09791 hypothetical protein id=14625157 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09791 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
|
|
13_1_40cm_scaffold_1578_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
5694..6779
|
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nucleotidyl transferase id=3102370 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleotidyl transferase
|
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13_1_40cm_scaffold_1578_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
6851..8152
|
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor 4 id=3102371 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GTP-binding protein LepA
|
|
13_1_40cm_scaffold_1578_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
8128..8568
|
GTP-binding protein lepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Elongation factor 4 id=2287868 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-binding protein LepA
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|
13_1_40cm_scaffold_1578_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
8691..9194
|
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Signal peptidase I id=3102374 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
signal peptidase I
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|
13_1_40cm_scaffold_1578_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
9306..10574
|
oxygen-independent coproporphyrinogen III oxidase (yggW) (EC:1.3.99.22) Tax=GWA2_Rokubacteria_73_35_curated
Coproporphyrinogen III oxidase id=3102376 bin=GWC2_Methylomirabilis_70_16 species=Corynebacterium genitalium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
coproporphyrinogen III oxidase
|
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13_1_40cm_scaffold_1578_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
10583..11608
|
heat-inducible transcriptional repressor; K03705 heat-inducible transcriptional repressor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Heat-inducible transcription repressor HrcA id=2287870 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hrcA; Heat-inducible transcription repressor
|
|
13_1_40cm_scaffold_1578_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
11745..12281
|
Protein GrpE id=2287871 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=GWA2_Rokubacteria_73_35_curated
heat shock protein GrpE
|
|
13_1_40cm_scaffold_1578_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
12287..13381
|
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Chaperone protein DnaJ id=2287872 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK
|
|
13_1_40cm_scaffold_1578_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
13386..14279
|
50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal protein L11 methyltransferase id=2287873 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L11 methyltransferase
|
|
13_1_40cm_scaffold_1578_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
14254..15042
|
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase E id=2287874 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA methyltransferase, RsmE family
|
|
13_1_40cm_scaffold_1578_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
15039..15467
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14625167 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_scaffold_1578_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
15614..16525
|
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=2287875 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium HF0770_27F21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
|
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13_1_40cm_scaffold_1578_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
17108..19333
|
ntrY; nitrogen regulation sensor histidine kinase NtrY, HAMP and PAS domain-containing; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=RIF
nitrogen regulation protein NtrY; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] id=14625170 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sensor histidine kinase, HAMP and PAS domain-containing
|
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13_1_40cm_scaffold_1578_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
19335..20705
|
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=GWA2_Rokubacteria_73_35_curated
Fis family transcriptional regulator
|
|
13_1_40cm_scaffold_1578_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
20715..20912
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14626506 bin=bin7_NC10_sister species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
|
|
13_1_40cm_scaffold_1578_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
20914..22155
|
atzC; N-isopropylammelide isopropylaminohydrolase (EC:3.5.99.4)
Amidohydrolase id=4792716 bin=GWC2_Methylomirabilis_70_16 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase family protein Tax=GWC2_Rokubacteria_70_16_curated
|
|
13_1_40cm_scaffold_1578_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
22244..22807
|
PyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RI
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR id=4792710 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
|
13_1_40cm_scaffold_1578_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
22809..23747
|
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) id=14625173 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2)
|
|
13_1_40cm_scaffold_1578_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
23744..25018
|
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=4530400 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_scaffold_1578_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
25065..25925
|
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) id=14625175 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; carbamoyl phosphate synthase small subunit
|
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13_1_40cm_scaffold_1578_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
26112..26378
|
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4530407 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_scaffold_1578_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
26409..29615
|
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5) id=14625178 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
|
|
13_1_40cm_scaffold_1578_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
29629..30456
|
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=4815544 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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