ggKbase home page

13_1_40cm_scaffold_170

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_170_1
Exophiala dermatitidis, Exophiala, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(2..226)
DNA (225bp) protein (75aa)
Sarcosine oxidase n=1 Tax=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) RepID=H6C090_EXODN
Sarcosine oxidase {ECO:0000313|EMBL:EHY56372.1}; TaxID=858893 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellacea
13_1_40cm_scaffold_170_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(253..1248)
DNA (996bp) protein (332aa)
Amino acid permease n=5 Tax=Bacillus cereus RepID=R8DNW2_BACCE
Amino acid permease {ECO:0000313|EMBL:EOO62348.1}; TaxID=1053175 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG1X2-3.;"
hypothetical protein
13_1_40cm_scaffold_170_3
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1245..1583)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI000371C4A1
Amino acid permease {ECO:0000313|EMBL:KEA55573.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" s
amino acid permease family protein
13_1_40cm_scaffold_170_4
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(1663..2580)
DNA (918bp) protein (306aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAQ7_9EURY
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EMR73747.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archa
Permease of the drug/metabolite transporter (DMT) superfamily
13_1_40cm_scaffold_170_5
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(2603..3727)
DNA (1125bp) protein (375aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0Q7_9CHLR
AraC family transcriptional regulator {ECO:0000313|EMBL:KIY09337.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
ada; transcriptional regulator AraC family
13_1_40cm_scaffold_170_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4465..5013
DNA (549bp) protein (183aa)
Nitroreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5J2_SPHTD
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACZ37508.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaer
13_1_40cm_scaffold_170_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

5074..6387
DNA (1314bp) protein (438aa)
tryptophan synthase subunit beta; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_13_Bathyarchaeota_46_16b_curated
pyridoxal-phosphate dependent TrpB-like protein; K06001 tryptophan synthase beta chain [EC:4.2.1.20] id=24474796 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tryptophan synthase subunit beta
13_1_40cm_scaffold_170_8
unknown

Not on your lists

comp(6702..6902)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_170_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7077..8006)
DNA (930bp) protein (310aa)
Putative serine protease DO-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL74_NITGG
serine protease DO-like protein
Putative serine protease DO-like protein {ECO:0000313|EMBL:AFU60198.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_scaffold_170_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8077..8724)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IME5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60197.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_scaffold_170_11
unknown

Not on your lists

8941..9411
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_scaffold_170_12
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(9408..10514)
DNA (1107bp) protein (369aa)
Chaperone protein DnaJ n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQC7_METH6
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RBG_16_Thaumarchaeota_49_8_curated
Chaperone protein DnaJ
13_1_40cm_scaffold_170_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10538..12421)
DNA (1884bp) protein (628aa)
Chaperone protein DnaK n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PYF0_METTM
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=RBG_13_Bathyarchaeota_46_16b_curated
dnaK; chaperone DnaK
13_1_40cm_scaffold_170_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(12418..13047)
DNA (630bp) protein (210aa)
Protein GrpE n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L8S1_9BACI
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RBG_16_Thaumarchaeota_49_8_curated
molecular chaperone GrpE
13_1_40cm_scaffold_170_15
Amycolatopsis benzoatilytica, Amycolatopsis, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

13266..13982
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000361F40A
13_1_40cm_scaffold_170_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14007..14870)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN69_ARCVS
hypothetical protein
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_scaffold_170_17
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

15453..16601
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7Z5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKR73759.1}; TaxID=1618468 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_scaffold_170_18
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(16614..17789)
DNA (1176bp) protein (392aa)
aminotransferase (EC:2.6.1.-) Tax=CG_Arma_02
Aminotransferase, class I and II n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I4N0_METB6
class I and II aminotransferase
13_1_40cm_scaffold_170_19
unknown

Not on your lists

comp(18065..18304)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_scaffold_170_20
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18897..21389
DNA (2493bp) protein (831aa)
lonB; peptidase S16, lon domain-containing protein (EC:3.4.21.-)
Peptidase S16, lon domain-containing protein {ECO:0000313|EMBL:CCJ37466.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCJ37466.1};; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobial
Peptidase S16, lon domain-containing protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KE51_METBM
13_1_40cm_scaffold_170_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(21379..21888)
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8Y3_STRVR
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GCN5-related N-acetyltransferase
13_1_40cm_scaffold_170_22
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22634..24109
DNA (1476bp) protein (492aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8G3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KIF29482.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_scaffold_170_23
unknown

Not on your lists

comp(24139..24303)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 23 items

View Taxonomy