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13_1_40cm_scaffold_1827

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1827_1
unknown

Not on your lists

2..220
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_1827_2
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227..1213
DNA (987bp) protein (329aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z013_DESAT
exeA; General secretion pathway protein A
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADH85170.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" sourc
13_1_40cm_scaffold_1827_3
unknown

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1447..1680
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_scaffold_1827_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1677..2933
DNA (1257bp) protein (419aa)
Bll8153 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89BJ5_BRADU
hypothetical protein
Bll8153 protein {ECO:0000313|EMBL:BAC53418.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_1_40cm_scaffold_1827_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3229..4422
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETR8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57602.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
amidohydrolase
13_1_40cm_scaffold_1827_6
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4419..6008
DNA (1590bp) protein (530aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1K0_SPHTD
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EYD76212.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;
family 5 extracellular solute-binding protein
13_1_40cm_scaffold_1827_7
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6018..6671
DNA (654bp) protein (218aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LV34_METRJ
Peptide ABC transporter {ECO:0000313|EMBL:KIX17903.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_1827_8
Ewingella americana, Ewingella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6641..6895
DNA (255bp) protein (85aa)
Dipeptide transporter membrane component of ABC superfamily n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SER0_DICD3
peptide transporter
Permease component of an ABC superfamily dipeptide transporter {ECO:0000313|EMBL:KFC78993.1}; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
13_1_40cm_scaffold_1827_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

6892..7719
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FF70_VERMA
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RBG_16_RIF_CHLX_72_14_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_1827_10
unknown

Not on your lists

comp(7905..8681)
DNA (777bp) protein (259aa)

This feature has no annotations

13_1_40cm_scaffold_1827_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..9137)
DNA (282bp) protein (94aa)
Blr4797 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KV3_BRADU
hypothetical protein
Blr4797 protein {ECO:0000313|EMBL:BAC50062.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_1_40cm_scaffold_1827_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9134..9550)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans CF2 RepID=J4JHC7_9BURK
molybdate ABC transporter periplasmic protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
bacterial extracellular solute-binding family protein
13_1_40cm_scaffold_1827_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9561..10391)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
putative hydrolase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TIM-barrel fold metal-dependent hydrolase
13_1_40cm_scaffold_1827_14

Not on your lists

comp(10669..12210)
DNA (1542bp) protein (514aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_scaffold_1827_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12245..13297)
DNA (1053bp) protein (351aa)
putative 2-dehydropantoate 2-reductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-dehydropantoate 2-reductase id=4221488 bin=GWA2_Methylomirabilis_73_35 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1827_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13546..14772
DNA (1227bp) protein (409aa)
Lyase-like protein n=1 Tax=Glaciecola sp. (strain 4H-3-7+YE-5) RepID=F4AMD9_GLAS4
lyase -like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
lyase -like protein
13_1_40cm_scaffold_1827_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(14848..16659)
DNA (1812bp) protein (604aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44) Tax=RBG_16_Chloroflexi_51_9_curated
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G769_ALIDK
13_1_40cm_scaffold_1827_18
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16656..18518)
DNA (1863bp) protein (621aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44) Tax=RBG_16_Chloroflexi_51_9_curated
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter related protein n=2 Tax=Bacteria RepID=C5T7I1_ACIDE
13_1_40cm_scaffold_1827_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18549..18959)
DNA (411bp) protein (137aa)
protein tyrosine phosphatase id=14626823 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
protein tyrosine phosphatase Tax=CSP1_6_Rokubacteria
protein tyrosine phosphatase
13_1_40cm_scaffold_1827_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18977..20113)
DNA (1137bp) protein (379aa)
Transporter, chromate ion transporter (CHR) family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JM15_SYNJB
Uncharacterized protein {ECO:0000313|EMBL:ETX06016.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
chromate transporter
13_1_40cm_scaffold_1827_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20123..21313)
DNA (1191bp) protein (397aa)
Chromate ion transporter (CHR) family chromate transporter n=1 Tax=Afipia felis ATCC 53690 RepID=K8NN00_AFIFE
Chromate ion transporter (CHR) family chromate transporter {ECO:0000313|EMBL:EKS29759.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
chrA; chromate resistance transport protein
13_1_40cm_scaffold_1827_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21382..22338
DNA (957bp) protein (319aa)
Chromate resistance exported protein id=4942500 bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ChrB protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_1827_23
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22409..23089
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIH1_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB96124.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica s
13_1_40cm_scaffold_1827_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23086..23994
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIC7_BEII9
Uncharacterized protein {ECO:0000313|EMBL:CDX61849.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
Displaying 24 items

View Taxonomy