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13_1_40cm_scaffold_2148

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2148_1
unknown

Not on your lists

1..120
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_scaffold_2148_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(413..1489)
DNA (1077bp) protein (359aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
Outer membrane protein/peptidoglycan-associated (Lipo)protein id=4347960 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
peptidoglycan-associated lipoprotein
13_1_40cm_scaffold_2148_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1623..2306
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00036C6D3F
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ75485.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
13_1_40cm_scaffold_2148_4
unknown

Not on your lists

2677..2898
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_2148_5
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2849..3382)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BD2FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99019.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_scaffold_2148_6
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3469..3858
DNA (390bp) protein (130aa)
Translation initiation inhibitor, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF38_PYRYC
Uncharacterized protein {ECO:0000313|EMBL:AKH84281.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
translation initiation inhibitor
13_1_40cm_scaffold_2148_7
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

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4357..4704
DNA (348bp) protein (116aa)
Glutamate dehydrogenase/leucine dehydrogenase {ECO:0000313|EMBL:EHI48784.1}; EC=1.4.1.9 {ECO:0000313|EMBL:EHI48784.1};; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 clus
Glutamate dehydrogenase/leucine dehydrogenase n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A249_9PROT
leucine dehydrogenase
13_1_40cm_scaffold_2148_8
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4704..4889
DNA (186bp) protein (62aa)
Glutamate dehydrogenase/leucine dehydrogenase {ECO:0000313|EMBL:EHI48784.1}; EC=1.4.1.9 {ECO:0000313|EMBL:EHI48784.1};; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 clus
13_1_40cm_scaffold_2148_9
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4918..5238
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A250_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHI48785.1}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
hypothetical protein
13_1_40cm_scaffold_2148_10
unknown

Not on your lists

5461..5862
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_2148_11
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5664..6521)
DNA (858bp) protein (286aa)
Beta-lactamase domain-containing protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XBM9_RHOOP
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EKT78246.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213
beta-lactamase domain-containing protein
13_1_40cm_scaffold_2148_12
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6543..7175)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037E30EF
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:CEA08754.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
DNA-3-methyladenine glycosylase I
13_1_40cm_scaffold_2148_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7190..7636)
DNA (447bp) protein (149aa)
4-oxalocrotonate tautomerase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B47969
Uncharacterized protein {ECO:0000313|EMBL:KJL19907.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
4-oxalocrotonate tautomerase family protein
13_1_40cm_scaffold_2148_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7642..8343)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTP3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
13_1_40cm_scaffold_2148_15
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8430..11204)
DNA (2775bp) protein (925aa)
LuxR family transcriptional regulator n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LBG6_9ACTO
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AGL16807.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N90
13_1_40cm_scaffold_2148_16
unknown

Not on your lists

11364..11678
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_scaffold_2148_17
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11835..12263)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MZ62_9ACTO
glyoxalase I/lactoylglutathione lyase
Glyoxalase I/lactoylglutathione lyase {ECO:0000313|EMBL:CCK24931.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawens
13_1_40cm_scaffold_2148_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12322..12783)
DNA (462bp) protein (154aa)
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:AIF82108.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Cand
hypothetical protein
13_1_40cm_scaffold_2148_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(12784..13200)
DNA (417bp) protein (139aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_scaffold_2148_20
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13197..13910)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2Z196_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD63772.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
13_1_40cm_scaffold_2148_21
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13928..14605)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFH6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75775.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
NADP oxidoreductase coenzyme F420-dependent
13_1_40cm_scaffold_2148_22
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15658..17496
DNA (1839bp) protein (613aa)
Regulatory protein LuxR n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WBL2_KINRD
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ABS04201.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BA
Displaying 22 items

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