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13_1_40cm_scaffold_2294

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2294_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..618)
DNA (618bp) protein (206aa)
Putative integron integrase (Fragment) id=3961972 bin=GWC2_Methylomirabilis_70_24 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
integron integrase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_2294_2
unknown

Not on your lists

1545..1967
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_scaffold_2294_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1980..2291
DNA (312bp) protein (104aa)
id=4701572 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4701572 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_2294_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2338..2922
DNA (585bp) protein (195aa)
Phage integrase protein (DNA breaking and rejoining enzyme) id=4701568 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phage integrase protein (DNA breaking and rejoining enzyme) Tax=GWA2_Rokubacteria_70_23_curated
putative phage integrase
13_1_40cm_scaffold_2294_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2919..3329
DNA (411bp) protein (137aa)
Phage integrase protein (DNA breaking and rejoining enzyme) id=4701568 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phage integrase protein (DNA breaking and rejoining enzyme) Tax=GWA2_Rokubacteria_70_23_curated
phage integrase family protein
13_1_40cm_scaffold_2294_6
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(3507..4595)
DNA (1089bp) protein (363aa)
Putative Phage integrase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIZ4_9BACT
integrase Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
putative phage integrase
13_1_40cm_scaffold_2294_7
unknown

Not on your lists

5831..6169
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_2294_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6791..7885
DNA (1095bp) protein (365aa)
Integron integrase id=3719176 bin=GWF2_Methylomirabilis_70_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integron integrase Tax=GWA2_Rokubacteria_70_23_curated
integron integrase
13_1_40cm_scaffold_2294_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8246..9094
DNA (849bp) protein (283aa)
Integrase family protein id=4177899 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integrase family protein Tax=GWC2_Rokubacteria_70_16_curated
integrase family protein
13_1_40cm_scaffold_2294_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9098..10444
DNA (1347bp) protein (449aa)
Putative transposase Y4QJ id=4177898 bin=GWC2_Methylomirabilis_70_16 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative transposase Tax=GWC2_Rokubacteria_70_16_curated
putative transposase
13_1_40cm_scaffold_2294_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

10641..11669
DNA (1029bp) protein (343aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14626841 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_2294_12
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11877..13559
DNA (1683bp) protein (561aa)
cya34; adenylate cyclase 3 (EC:4.6.1.1)
Adenylate cyclase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H6A1_9RHIZ
Adenylate cyclase {ECO:0000313|EMBL:EPE94229.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
13_1_40cm_scaffold_2294_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13736..14743
DNA (1008bp) protein (336aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14626841 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_2294_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14865..15800
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=A8ZKI2_ACAM1
Uncharacterized protein {ECO:0000313|EMBL:KGM30937.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
hypothetical protein
13_1_40cm_scaffold_2294_15
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15813..16310
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudomonas syringae pv. aceris str. M302273 RepID=F3JCT6_PSESX
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGH69659.1}; TaxID=629270 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringa
13_1_40cm_scaffold_2294_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16621..17736)
DNA (1116bp) protein (372aa)
ISCps8, transposase Tax=GWA2_Rokubacteria_70_23_curated
ISCps8, transposase id=4219936 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ISCps8, transposase
13_1_40cm_scaffold_2294_17
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17869..18168
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DU52_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAB57580.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensi
hypothetical protein
13_1_40cm_scaffold_2294_18
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18197..18517)
DNA (321bp) protein (107aa)
Putative uncharacterized protein id=4954840 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_1_40cm_scaffold_2294_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18498..18824)
DNA (327bp) protein (109aa)
Uncharacterized protein id=4954838 bin=GWC2_Methylomirabilis_70_24 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_40cm_scaffold_2294_20
unknown

Not on your lists

19375..19794
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_scaffold_2294_21
unknown

Not on your lists

19831..20343
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_scaffold_2294_22
unknown

Not on your lists

21064..21513
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_scaffold_2294_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21822..23309)
DNA (1488bp) protein (496aa)
Putative Zn dependent protease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ89_9BURK
Putative Zn dependent protease {ECO:0000313|EMBL:EIK89279.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
peptidase, M48 family
13_1_40cm_scaffold_2294_24
unknown

Not on your lists

comp(23297..23698)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_2294_25
Vibrio sp. S2757, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23670..24926)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KBK2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KJY82374.1}; TaxID=579748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. S2757.;"
CHASE2 domain protein
Displaying 25 items

View Taxonomy