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13_1_40cm_scaffold_2524

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2524_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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150..1652
DNA (1503bp) protein (501aa)
proteasome component Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
proteasome component id=14627258 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proteasome component
13_1_40cm_scaffold_2524_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1765..2571
DNA (807bp) protein (269aa)
proteasome A-type and B-type Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative proteasome A-type and B-type id=2228958 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proteasome A-type and B-type
13_1_40cm_scaffold_2524_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2574..3266
DNA (693bp) protein (231aa)
proteasome A-type and B-type Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative proteasome A-type and B-type id=2228956 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proteasome A-type and B-type
13_1_40cm_scaffold_2524_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3340..4695
DNA (1356bp) protein (452aa)
pafA; proteasome accessory factor PafA (EC:6.3.2.-) Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] id=14627261 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pafA; proteasome accessory factor PafA (EC:6.3.2.-)
13_1_40cm_scaffold_2524_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4915..5340
DNA (426bp) protein (142aa)
hypothetical protein id=14627436 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_2524_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5365..5778
DNA (414bp) protein (138aa)
hypothetical protein id=14627437 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_2524_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5775..6629)
DNA (855bp) protein (285aa)
DMT family permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DMT family permease id=4622876 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DMT family permease
13_1_40cm_scaffold_2524_8
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..7281)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIH1_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB96124.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica s
13_1_40cm_scaffold_2524_9
Bacillus sp. JCM 19046, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7286..8581)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WCQ0_BACSK
S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:GAF19592.1}; TaxID=1460640 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19046.;"
hypothetical protein
13_1_40cm_scaffold_2524_10
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(8601..9374)
DNA (774bp) protein (258aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" sour
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
enoyl-ACP reductase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4403F
13_1_40cm_scaffold_2524_11
unknown

Not on your lists

comp(9441..9725)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_2524_12
unknown

Not on your lists

comp(9782..10102)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_scaffold_2524_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10215..11198
DNA (984bp) protein (328aa)
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase Tax=CSP1_6_Rokubacteria
luciferase family protein
13_1_40cm_scaffold_2524_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11195..11923
DNA (729bp) protein (243aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=14627264 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
13_1_40cm_scaffold_2524_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11920..13104
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 id=2228940 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily protein
13_1_40cm_scaffold_2524_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13036..14133)
DNA (1098bp) protein (366aa)
Putative integral membrane protein id=2228897 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein Tax=GWA2_Rokubacteria_73_35_curated
integral membrane protein
13_1_40cm_scaffold_2524_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14161..15378
DNA (1218bp) protein (406aa)
Uncharacterized protein id=2228896 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
membrane protein
13_1_40cm_scaffold_2524_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

15527..16411
DNA (885bp) protein (295aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=3239155 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar ABC transporter substrate-binding protein
13_1_40cm_scaffold_2524_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16408..16758
DNA (351bp) protein (117aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein id=14627267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter substrate-binding protein
13_1_40cm_scaffold_2524_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16985..18004
DNA (1020bp) protein (340aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein id=14627267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
sugar ABC transporter substrate-binding protein
13_1_40cm_scaffold_2524_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18005..19567
DNA (1563bp) protein (521aa)
Putative uncharacterized protein id=3842142 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying 21 items

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