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13_1_40cm_scaffold_2771

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2771_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..226
DNA (225bp) protein (75aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-binding protein
13_1_40cm_scaffold_2771_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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1571..2041
DNA (471bp) protein (157aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_scaffold_2771_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

2065..2328
DNA (264bp) protein (88aa)
molybdopterin converting factor n=1 Tax=Thioalkalivibrio sp. ALMg13-2 RepID=UPI000381FC3B
moaD; molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Acidobacteria_68_9_curated
molybdenum cofactor biosynthesis protein
13_1_40cm_scaffold_2771_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2347..2811
DNA (465bp) protein (155aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdopterin biosynthesis MoaE protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJF4_9CHLR
molybdopterin biosynthesis MoaE protein
13_1_40cm_scaffold_2771_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2804..3832
DNA (1029bp) protein (343aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Molybdenum cofactor biosynthesis protein A id=2653035 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moaA; molybdenum cofactor biosynthesis protein A
13_1_40cm_scaffold_2771_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

3897..4826
DNA (930bp) protein (310aa)
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Acidobacteria_68_9_curated
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
13_1_40cm_scaffold_2771_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(4823..5602)
DNA (780bp) protein (260aa)
sdhB; succinate dehydrogenase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RBG_16_Acidobacteria_68_9_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6R6_HERA2
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
13_1_40cm_scaffold_2771_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5602..7515)
DNA (1914bp) protein (638aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:ABU59134.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ABU59134.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNJ3_ROSCS
13_1_40cm_scaffold_2771_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7518..8144)
DNA (627bp) protein (209aa)
succinate dehydrogenase n=1 Tax=Streptomyces sp. AA0539 RepID=UPI0002D60479
succinate dehydrogenase/fumarate reductase cytochrome b subunit
Succinate dehydrogenase/fumarate reductase cytochrome b subunit {ECO:0000313|EMBL:AHH96556.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" sour
13_1_40cm_scaffold_2771_10
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8297..8698
DNA (402bp) protein (134aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Clostridium sp. CAG:264 RepID=R5KA55_9CLOT
13_1_40cm_scaffold_2771_11
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

8695..9945
DNA (1251bp) protein (417aa)
putative oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Chloroflexi_66_10_curated
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain-containing protein id=4451068 bin=GWF2_Lentisphaerae_57_35 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
putative oxidoreductase
13_1_40cm_scaffold_2771_12
unknown

Not on your lists

comp(9946..10218)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_scaffold_2771_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10258..10623)
DNA (366bp) protein (122aa)
Response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y3_GEMAT
GAF sensor hybrid histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator
13_1_40cm_scaffold_2771_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10617..11207)
DNA (591bp) protein (197aa)
atoS; signal transduction histidine-protein kinase AtoS (EC:2.7.13.3)
Signal transduction histidine-protein kinase AtoS n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LSJ2_THEPS
GAF sensor hybrid histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_2771_15
unknown

Not on your lists

12248..12676
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_scaffold_2771_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12878..14482
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZR2_ACISM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_2771_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14463..14990)
DNA (528bp) protein (176aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Deoxycytidine triphosphate deaminase id=3331664 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Deoxycytidine triphosphate deaminase
13_1_40cm_scaffold_2771_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15135..15512
DNA (378bp) protein (126aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z4_GEMAT
NAD(P)H-quinone oxidoreductase subunit 3
13_1_40cm_scaffold_2771_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15532..16152
DNA (621bp) protein (207aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_1_40cm_scaffold_2771_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16149..16766
DNA (618bp) protein (206aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
13_1_40cm_scaffold_2771_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16763..17050
DNA (288bp) protein (96aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
Displaying 21 items

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