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13_1_40cm_scaffold_285

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_285_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..943)
DNA (942bp) protein (314aa)
FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Bifunctional protein FolC: Folylpolyglutamate synthase and Dihydrofolate synthase id=3240645 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_285_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(951..1811)
DNA (861bp) protein (287aa)
accD; acetyl-CoA carboxylase carboxyltransferase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=3240638 bin=GWC2_Methylomirabilis_70_16 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA carboxyl transferase
13_1_40cm_scaffold_285_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1818..2813)
DNA (996bp) protein (332aa)
tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWA2_Rokubacteria_73_35_curated
Tryptophan synthase alpha chain id=4059711 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trpA; tryptophan synthase subunit alpha
13_1_40cm_scaffold_285_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2813..3949)
DNA (1137bp) protein (379aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) Tax=GWA2_Rokubacteria_73_35_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain id=4059712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_285_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3946..4632)
DNA (687bp) protein (229aa)
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=14627082 bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=CSP1_6_Rokubacteria
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
13_1_40cm_scaffold_285_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4823..5623)
DNA (801bp) protein (267aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase id=4059714 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_285_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5634..6839)
DNA (1206bp) protein (402aa)
Quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Nicotinate phosphoribosyltransferase id=4082176 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nicotinate phosphoribosyltransferase
13_1_40cm_scaffold_285_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7118..7984)
DNA (867bp) protein (289aa)
galU; glucose-1-phosphate uridylyltransferase (EC:2.7.7.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=14625246 bin=bin7_NC10_sister species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin7_NC10_sister organism_group=NC10
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
13_1_40cm_scaffold_285_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8082..9263)
DNA (1182bp) protein (394aa)
glycosyl transferase family protein; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase id=4059719 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
13_1_40cm_scaffold_285_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9260..10240)
DNA (981bp) protein (327aa)
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-) Tax=GWA2_Rokubacteria_73_35_curated
putative uDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
Putative UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase id=4059720 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_285_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10374..10988)
DNA (615bp) protein (205aa)
LmbE family protein id=4059721 bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LmbE family protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_285_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10989..13148)
DNA (2160bp) protein (720aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4546759 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
WbqC-like family protein
13_1_40cm_scaffold_285_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13145..14305)
DNA (1161bp) protein (387aa)
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4546758 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
13_1_40cm_scaffold_285_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14302..16422)
DNA (2121bp) protein (707aa)
hepB; glycosyl transferase (EC:2.4.1.57)
glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Predicted glycosyl transferase, group 1 id=4546757 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_285_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16454..18349)
DNA (1896bp) protein (632aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Asparagine synthetase id=4546756 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_285_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18382..19488)
DNA (1107bp) protein (369aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Glycosyl transferase group 1 id=4948476 bin=GWA2_Elusimicrobia_56_46 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
group 1 glycosyl transferase
13_1_40cm_scaffold_285_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19488..20645)
DNA (1158bp) protein (386aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Glycosyl transferase group 1 id=4546745 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_1_40cm_scaffold_285_18
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20638..22068)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3T9_GEODF
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:GAM11409.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacte
hypothetical protein
13_1_40cm_scaffold_285_19
RLO_PLX_64_10, Bacteria

Not on your lists

comp(22065..23171)
DNA (1107bp) protein (369aa)
Group 1 glycosyl transferase n=2 Tax=Halorubrum distributum RepID=M0EF26_9EURY
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
group 1 glycosyl transferase
13_1_40cm_scaffold_285_20
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(23180..24127)
DNA (948bp) protein (316aa)
Glycosyl transferase family 2 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIY6_ROSCS
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABU57444.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflex
13_1_40cm_scaffold_285_21
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(24138..25067)
DNA (930bp) protein (310aa)
Glycosyl transferase family 2 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M183_ACIFD
putative glycosyltransferase Tax=RBG_13_Nitrospirae_43_8_curated
family 2 glycosyl transferase
13_1_40cm_scaffold_285_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25064..25705)
DNA (642bp) protein (214aa)
Membrane-associated protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E7A0_9ACTN
Membrane-associated protein {ECO:0000313|EMBL:EHN10425.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacte
13_1_40cm_scaffold_285_23
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(25725..27179)
DNA (1455bp) protein (485aa)
Polysaccharide biosynthesis protein n=1 Tax=Geobacter metallireducens RCH3 RepID=H1L5Z7_GEOME
polysaccharide biosynthesis protein Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
undecaprenyl-diphospho-oligosaccharide flippase
13_1_40cm_scaffold_285_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(27176..27721)
DNA (546bp) protein (182aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037B5F6A
13_1_40cm_scaffold_285_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(27718..29034)
DNA (1317bp) protein (439aa)
hypothetical protein id=14628091 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_285_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(29041..30360)
DNA (1320bp) protein (440aa)
non-specific protein-tyrosine kinase (EC:2.7.10.2); K08253 non-specific protein-tyrosine kinase [EC:2.7.10.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M56 BlaR1 id=4205777 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
capsular biosynthesis protein
Displaying 26 items

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