ggKbase home page

13_1_40cm_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3_1
unknown

Not on your lists

comp(318..656)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_scaffold_3_2
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

787..1032
DNA (246bp) protein (82aa)
dam; adenine-specific DNA methyltransferase (EC:2.1.1.72)
Adenine-specific DNA methyltransferase {ECO:0000313|EMBL:ACE84877.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ACE84877.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Adenine-specific DNA methyltransferase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHX4_CELJU
13_1_40cm_scaffold_3_3
unknown

Not on your lists

1371..2141
DNA (771bp) protein (257aa)

This feature has no annotations

13_1_40cm_scaffold_3_4
Perkinsus marinus, Perkinsus, Perkinsida, Eukaryota

Not on your lists

comp(2191..2730)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) RepID=C5L6Q4_PERM5
Putative uncharacterized protein {ECO:0000313|EMBL:EER07588.1}; TaxID=423536 species="Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus.;" source="Perkinsus marinus (strain ATCC 5098
D,D-heptose 1,7-bisphosphate phosphatase
13_1_40cm_scaffold_3_5
unknown

Not on your lists

comp(2730..3377)
DNA (648bp) protein (216aa)

This feature has no annotations

13_1_40cm_scaffold_3_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3554..3766
DNA (213bp) protein (71aa)
DNA binding domain protein, excisionase family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5Z2_9CHLR
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:EFH80403.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sour
13_1_40cm_scaffold_3_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3821..5230)
DNA (1410bp) protein (470aa)
Transposase, IS605 OrfB family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBV2_9CHLR
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EFH89884.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacte
transposase, family IS1341
13_1_40cm_scaffold_3_8
unknown

Not on your lists

comp(5543..5719)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_scaffold_3_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5716..6075)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U272_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82740.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_3_10
unknown

Not on your lists

comp(6135..6422)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_scaffold_3_11
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6443..8056)
DNA (1614bp) protein (538aa)
P4 alpha zinc-binding protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XT09_9BACT
DNA primase {ECO:0000313|EMBL:KHK02358.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. Tom
13_1_40cm_scaffold_3_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8201..9544)
DNA (1344bp) protein (448aa)
UPI0003CF282A related cluster n=1 Tax=unknown RepID=UPI0003CF282A
Uncharacterized protein {ECO:0000313|EMBL:ESW92945.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
13_1_40cm_scaffold_3_13
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9766..10017)
DNA (252bp) protein (84aa)
Transcriptional regulator {ECO:0000313|EMBL:ERS88599.1}; TaxID=1397532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter s
13_1_40cm_scaffold_3_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10268..10621
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U078_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82218.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_1_40cm_scaffold_3_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10656..11864
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXZ1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84987.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_scaffold_3_16
unknown

Not on your lists

comp(11964..12182)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_3_17
unknown

Not on your lists

comp(12204..12569)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_3_18
unknown

Not on your lists

comp(12738..13106)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_scaffold_3_19

Not on your lists

13395..14063
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL78499.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_scaffold_3_20
unknown

Not on your lists

14432..14590
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_scaffold_3_21
unknown

Not on your lists

14594..14923
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_scaffold_3_22
unknown

Not on your lists

14926..15123
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_3_23
unknown

Not on your lists

15071..15337
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_scaffold_3_24
unknown

Not on your lists

15337..15660
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_scaffold_3_25
unknown

Not on your lists

15710..16012
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_scaffold_3_26
unknown

Not on your lists

15999..16229
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_scaffold_3_27
unknown

Not on your lists

16540..16875
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_scaffold_3_28
unknown

Not on your lists

17029..17388
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_scaffold_3_29
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

17513..17773
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QI62_9NOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY44831.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
13_1_40cm_scaffold_3_30
unknown

Not on your lists

18064..18459
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying items 1-30 of 141 in total

View Taxonomy